Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm12608-201ENSMUST00000122013 1715 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm37663-201ENSMUST00000191887 2299 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm42998-201ENSMUST00000197053 2371 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Mir290a-201ENSMUST00000104627 83 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm11987-201ENSMUST00000118524 381 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm14293-201ENSMUST00000118528 577 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm14899-201ENSMUST00000118673 548 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm14631-201ENSMUST00000119067 594 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm15153-201ENSMUST00000119867 274 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm26480-201ENSMUST00000122619 297 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm16274-201ENSMUST00000139251 592 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm22262-201ENSMUST00000158713 86 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm17786-201ENSMUST00000182000 427 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm27315-201ENSMUST00000183977 154 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Mir6357-201ENSMUST00000184246 104 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm8392-201ENSMUST00000185647 835 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm18875-201ENSMUST00000188563 882 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm18225-201ENSMUST00000216708 742 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Olfr809-203ENSMUST00000218237 1100 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 AC152951.1-201ENSMUST00000218907 266 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm23104-201ENSMUST00000083722 104 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 AC132336.1-201ENSMUST00000222844 1740 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm3089-201ENSMUST00000200804 1395 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm3302-201ENSMUST00000201462 1395 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gm44130-201ENSMUST00000205157 3004 ntBASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim47Q8C0E3 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 104.8 ms