Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ClpbQ60649 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
ClpbQ60649 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ClpbQ60649 Gm24142-201ENSMUST00000101960 107 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Gm24272-201ENSMUST00000102329 98 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
ClpbQ60649 Gm11271-201ENSMUST00000116054 440 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Gm9427-201ENSMUST00000116187 651 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Gm12565-201ENSMUST00000119004 649 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Gm7350-201ENSMUST00000120964 636 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ClpbQ60649 Gm3757-201ENSMUST00000125878 675 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC6.04□□□□□ -1.44
ClpbQ60649 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ClpbQ60649 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC6.04□□□□□ -1.44
ClpbQ60649 Gm23903-201ENSMUST00000157566 131 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Gm22600-201ENSMUST00000157598 269 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.04□□□□□ -1.44
ClpbQ60649 Gm10177-201ENSMUST00000160052 444 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ClpbQ60649 Gm44370-201ENSMUST00000175436 112 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ClpbQ60649 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ClpbQ60649 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ClpbQ60649 Mir6244-201ENSMUST00000184156 117 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ClpbQ60649 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ClpbQ60649 Gm37376-201ENSMUST00000192176 453 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.04□□□□□ -1.44
ClpbQ60649 Gm38291-201ENSMUST00000193671 259 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ClpbQ60649 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.04□□□□□ -1.44
ClpbQ60649 Gm19739-201ENSMUST00000195941 153 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Gm43390-201ENSMUST00000196614 421 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Gm44538-201ENSMUST00000205615 348 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.04□□□□□ -1.44
ClpbQ60649 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Gm5321-201ENSMUST00000072050 447 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ClpbQ60649 Gm10145-201ENSMUST00000077776 462 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ClpbQ60649 Gm10705-201ENSMUST00000098980 461 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
ClpbQ60649 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Robo2-210ENSMUST00000226478 8059 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ClpbQ60649 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
ClpbQ60649 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ClpbQ60649 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.04□□□□□ -1.44
ClpbQ60649 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
ClpbQ60649 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ClpbQ60649 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ClpbQ60649 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ClpbQ60649 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ClpbQ60649 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
ClpbQ60649 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ClpbQ60649 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.03□□□□□ -1.44
ClpbQ60649 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.03□□□□□ -1.44
ClpbQ60649 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ClpbQ60649 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ClpbQ60649 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ClpbQ60649 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ClpbQ60649 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ClpbQ60649 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
ClpbQ60649 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ClpbQ60649 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.03□□□□□ -1.44
ClpbQ60649 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
ClpbQ60649 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ClpbQ60649 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ClpbQ60649 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ClpbQ60649 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ClpbQ60649 Gm26146-201ENSMUST00000104478 185 ntBASIC6.03□□□□□ -1.44
ClpbQ60649 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
ClpbQ60649 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.03□□□□□ -1.44
ClpbQ60649 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
ClpbQ60649 Gm15181-201ENSMUST00000120142 177 ntBASIC6.03□□□□□ -1.44
ClpbQ60649 Gm12094-201ENSMUST00000121781 472 ntBASIC6.03□□□□□ -1.44
ClpbQ60649 Gm12438-201ENSMUST00000122034 336 ntBASIC6.03□□□□□ -1.44
ClpbQ60649 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.03□□□□□ -1.44
ClpbQ60649 Gm5125-201ENSMUST00000148614 624 ntBASIC6.03□□□□□ -1.44
ClpbQ60649 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6.03□□□□□ -1.44
ClpbQ60649 Gm25374-201ENSMUST00000158158 101 ntBASIC6.03□□□□□ -1.44
ClpbQ60649 Gm26355-201ENSMUST00000158220 105 ntBASIC6.03□□□□□ -1.44
ClpbQ60649 Gm23259-201ENSMUST00000158318 303 ntBASIC6.03□□□□□ -1.44
ClpbQ60649 Gm23343-201ENSMUST00000158964 143 ntBASIC6.03□□□□□ -1.44
ClpbQ60649 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.03□□□□□ -1.44
ClpbQ60649 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.03□□□□□ -1.44
ClpbQ60649 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ClpbQ60649 Gm37511-201ENSMUST00000192901 294 ntBASIC6.03□□□□□ -1.44
ClpbQ60649 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.03□□□□□ -1.44
ClpbQ60649 Gm44163-201ENSMUST00000205140 475 ntBASIC6.03□□□□□ -1.44
ClpbQ60649 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.03□□□□□ -1.44
ClpbQ60649 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms