Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm25904-201ENSMUST00000158491 143 ntBASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Gm29509-201ENSMUST00000185716 321 ntBASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Gm37358-201ENSMUST00000195492 479 ntBASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Gm43743-202ENSMUST00000198353 491 ntBASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Gm43084-201ENSMUST00000200696 947 ntBASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 AC159886.1-201ENSMUST00000217099 1091 ntBASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm26289-201ENSMUST00000104169 131 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm15765-201ENSMUST00000118407 910 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm6977-201ENSMUST00000121568 512 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm6541-201ENSMUST00000165542 561 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm20620-201ENSMUST00000177528 168 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm28973-201ENSMUST00000189310 613 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm5694-201ENSMUST00000195648 641 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm43354-201ENSMUST00000196862 346 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm5229-201ENSMUST00000039375 354 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm26442-201ENSMUST00000082588 153 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Gm6990-201ENSMUST00000086830 348 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Trafd1Q3UDK1 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm11256-201ENSMUST00000118109 829 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm12400-201ENSMUST00000120915 1003 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms