Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 AC133176.1-201ENSMUST00000226668 219 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Msx2Q03358 CT030684.2-201ENSMUST00000228946 826 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Msx2Q03358 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Msx2Q03358 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.61□□□□□ -1.35
Msx2Q03358 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.61□□□□□ -1.35
Msx2Q03358 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Msx2Q03358 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm9030-201ENSMUST00000218405 2410 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm9029-201ENSMUST00000219232 2410 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Msx2Q03358 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.61□□□□□ -1.35
Msx2Q03358 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Msx2Q03358 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Msx2Q03358 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Msx2Q03358 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Msx2Q03358 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC6.6□□□□□ -1.35
Msx2Q03358 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.6□□□□□ -1.35
Msx2Q03358 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Msx2Q03358 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Mir678-201ENSMUST00000102114 84 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Mir697-201ENSMUST00000102316 109 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Msx2Q03358 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm15715-201ENSMUST00000118032 283 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Gm15094-201ENSMUST00000118394 1131 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Gm11258-201ENSMUST00000121086 1218 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC6.6□□□□□ -1.35
Msx2Q03358 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.6□□□□□ -1.35
Msx2Q03358 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.6□□□□□ -1.35
Msx2Q03358 Mup-ps4-201ENSMUST00000151005 539 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Gm25505-201ENSMUST00000157220 246 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Gm18354-201ENSMUST00000173515 1068 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Gm6472-201ENSMUST00000178147 651 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Gm4373-201ENSMUST00000178571 556 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Gm27156-201ENSMUST00000184589 754 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC6.6□□□□□ -1.35
Msx2Q03358 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm3841-201ENSMUST00000191399 451 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Gm7341-201ENSMUST00000192183 926 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC6.6□□□□□ -1.35
Msx2Q03358 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm44726-201ENSMUST00000203427 217 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Gm44112-201ENSMUST00000204787 372 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Gm18410-201ENSMUST00000207199 577 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC6.6□□□□□ -1.35
Msx2Q03358 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.6□□□□□ -1.35
Msx2Q03358 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC6.6□□□□□ -1.35
Msx2Q03358 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Msx2Q03358 AC116726.2-201ENSMUST00000217629 986 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC6.6□□□□□ -1.35
Msx2Q03358 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC6.6□□□□□ -1.35
Msx2Q03358 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Msx2Q03358 AC154747.4-202ENSMUST00000223826 852 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 AC162183.1-201ENSMUST00000224843 472 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Msx2Q03358 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Msx2Q03358 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Msx2Q03358 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Msx2Q03358 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.6□□□□□ -1.35
Msx2Q03358 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Msx2Q03358 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
Msx2Q03358 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Msx2Q03358 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms