Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm8844-201ENSMUST00000119460 2614 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm12636-201ENSMUST00000117395 624 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm13141-201ENSMUST00000117417 456 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm13080-201ENSMUST00000120556 420 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm15242-201ENSMUST00000122459 283 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm16260-201ENSMUST00000155141 304 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm26371-201ENSMUST00000157829 104 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm3076-201ENSMUST00000161613 451 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm4152-201ENSMUST00000172675 259 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm23968-201ENSMUST00000175047 125 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Mir7669-201ENSMUST00000183442 58 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm29598-201ENSMUST00000188996 588 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm37716-201ENSMUST00000193553 947 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm7299-201ENSMUST00000194441 581 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm29784-201ENSMUST00000196217 406 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm42771-201ENSMUST00000198342 2486 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm7492-201ENSMUST00000201745 725 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm31532-201ENSMUST00000203555 767 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm44727-201ENSMUST00000204225 451 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm43954-201ENSMUST00000204634 544 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm4556-201ENSMUST00000217808 355 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm24150-201ENSMUST00000082759 104 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm14849-201ENSMUST00000122293 2846 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Gm42455-201ENSMUST00000199761 2736 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 AC105407.2-205ENSMUST00000224680 2733 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col8a1Q00780 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC5.95□□□□□ -1.46
Col8a1Q00780 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col8a1Q00780 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm21043-201ENSMUST00000199316 1517 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm15229-201ENSMUST00000146636 1398 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm37786-201ENSMUST00000191714 3225 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm42763-201ENSMUST00000199595 2087 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm22426-201ENSMUST00000103811 96 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm11845-201ENSMUST00000117886 327 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm13454-201ENSMUST00000118166 483 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm13359-201ENSMUST00000119000 695 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms