Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.74□□□□□ -1.49
Tnfsf4P43488 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.74□□□□□ -1.49
Tnfsf4P43488 Gm43929-201ENSMUST00000203025 409 ntBASIC5.74□□□□□ -1.49
Tnfsf4P43488 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.74□□□□□ -1.49
Tnfsf4P43488 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC5.74□□□□□ -1.49
Tnfsf4P43488 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Tnfsf4P43488 AC105324.1-201ENSMUST00000227844 386 ntBASIC5.74□□□□□ -1.49
Tnfsf4P43488 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Tnfsf4P43488 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Tnfsf4P43488 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Tnfsf4P43488 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.74□□□□□ -1.49
Tnfsf4P43488 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Tnfsf4P43488 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Tnfsf4P43488 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.74□□□□□ -1.49
Tnfsf4P43488 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Tnfsf4P43488 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.74□□□□□ -1.49
Tnfsf4P43488 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.74□□□□□ -1.49
Tnfsf4P43488 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.74□□□□□ -1.49
Tnfsf4P43488 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.74□□□□□ -1.49
Tnfsf4P43488 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Tnfsf4P43488 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Tnfsf4P43488 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Tnfsf4P43488 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Tnfsf4P43488 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Tnfsf4P43488 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Tnfsf4P43488 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Tnfsf4P43488 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Tnfsf4P43488 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.74□□□□□ -1.49
Tnfsf4P43488 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
Tnfsf4P43488 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Tnfsf4P43488 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Tnfsf4P43488 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Tnfsf4P43488 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.74□□□□□ -1.49
Tnfsf4P43488 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.74□□□□□ -1.49
Tnfsf4P43488 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.73□□□□□ -1.49
Tnfsf4P43488 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Tnfsf4P43488 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Tnfsf4P43488 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.73□□□□□ -1.49
Tnfsf4P43488 Mir683-2-201ENSMUST00000102099 109 ntBASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm25593-201ENSMUST00000102272 96 ntBASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm22952-201ENSMUST00000116720 120 ntBASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm16007-201ENSMUST00000117837 286 ntBASIC5.73□□□□□ -1.49
Tnfsf4P43488 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm5843-201ENSMUST00000121631 476 ntBASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm24103-201ENSMUST00000174930 77 ntBASIC5.73□□□□□ -1.49
Tnfsf4P43488 Mir683-1-201ENSMUST00000179371 109 ntBASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm37135-201ENSMUST00000192652 534 ntBASIC5.73□□□□□ -1.49
Tnfsf4P43488 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm43906-201ENSMUST00000203194 906 ntBASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm44053-201ENSMUST00000203364 929 ntBASIC5.73□□□□□ -1.49
Tnfsf4P43488 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm18689-201ENSMUST00000203969 902 ntBASIC5.73□□□□□ -1.49
Tnfsf4P43488 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Tnfsf4P43488 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Tnfsf4P43488 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Tnfsf4P43488 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.73□□□□□ -1.49
Tnfsf4P43488 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Tnfsf4P43488 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.72□□□□□ -1.49
Tnfsf4P43488 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Tnfsf4P43488 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Tnfsf4P43488 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm16044-201ENSMUST00000118475 450 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm12099-201ENSMUST00000118660 750 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm12813-201ENSMUST00000119615 902 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm14863-201ENSMUST00000119648 307 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm14054-201ENSMUST00000120744 704 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm12804-201ENSMUST00000121030 999 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm6977-201ENSMUST00000121568 512 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm16330-201ENSMUST00000128324 297 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm20453-201ENSMUST00000173968 226 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms