Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Usp4P35123 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.87□□□□□ -1.31
Usp4P35123 Gm26416-201ENSMUST00000104280 134 ntBASIC6.87□□□□□ -1.31
Usp4P35123 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Usp4P35123 Gm14870-201ENSMUST00000118414 156 ntBASIC6.87□□□□□ -1.31
Usp4P35123 Gm12447-201ENSMUST00000119110 470 ntBASIC6.87□□□□□ -1.31
Usp4P35123 Gm15971-201ENSMUST00000119372 211 ntBASIC6.87□□□□□ -1.31
Usp4P35123 Gm14463-201ENSMUST00000121117 498 ntBASIC6.87□□□□□ -1.31
Usp4P35123 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp4P35123 Gm12504-202ENSMUST00000148026 306 ntBASIC6.87□□□□□ -1.31
Usp4P35123 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp4P35123 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp4P35123 Atp2b4-208ENSMUST00000167348 243 ntBASIC6.87□□□□□ -1.31
Usp4P35123 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp4P35123 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Usp4P35123 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC6.87□□□□□ -1.31
Usp4P35123 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Usp4P35123 Trbv28-201ENSMUST00000192804 264 ntBASIC6.87□□□□□ -1.31
Usp4P35123 Gm19739-201ENSMUST00000195941 153 ntBASIC6.87□□□□□ -1.31
Usp4P35123 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.87□□□□□ -1.31
Usp4P35123 Gm44896-201ENSMUST00000206190 772 ntBASIC6.87□□□□□ -1.31
Usp4P35123 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.87□□□□□ -1.31
Usp4P35123 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.87□□□□□ -1.31
Usp4P35123 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.87□□□□□ -1.31
Usp4P35123 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Usp4P35123 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.87□□□□□ -1.31
Usp4P35123 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6.87□□□□□ -1.31
Usp4P35123 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.87□□□□□ -1.31
Usp4P35123 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Usp4P35123 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp4P35123 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp4P35123 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp4P35123 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp4P35123 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp4P35123 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp4P35123 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp4P35123 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp4P35123 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp4P35123 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Usp4P35123 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
Usp4P35123 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp4P35123 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp4P35123 Gm18491-201ENSMUST00000192492 1594 ntBASIC6.86□□□□□ -1.31
Usp4P35123 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp4P35123 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp4P35123 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Usp4P35123 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp4P35123 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp4P35123 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp4P35123 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp4P35123 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp4P35123 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.86□□□□□ -1.31
Usp4P35123 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Gm42615-201ENSMUST00000197704 1820 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Usp4P35123 Gm11976-201ENSMUST00000119236 295 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Gm12229-201ENSMUST00000120487 468 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Gm16359-201ENSMUST00000124511 289 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp4P35123 Gm24781-201ENSMUST00000157636 117 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Gm16298-201ENSMUST00000161107 420 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp4P35123 Gm27033-201ENSMUST00000183226 544 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Gm27864-201ENSMUST00000183704 190 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.86□□□□□ -1.31
Usp4P35123 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp4P35123 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC6.86□□□□□ -1.31
Usp4P35123 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp4P35123 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp4P35123 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.86□□□□□ -1.31
Usp4P35123 Gm37543-201ENSMUST00000192443 1031 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.86□□□□□ -1.31
Usp4P35123 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.86□□□□□ -1.31
Usp4P35123 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Gm2860-201ENSMUST00000199226 707 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Gm44227-201ENSMUST00000203576 241 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Gm44856-201ENSMUST00000206639 304 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp4P35123 Gm7351-201ENSMUST00000210745 580 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.86□□□□□ -1.31
Usp4P35123 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.86□□□□□ -1.31
Usp4P35123 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC6.86□□□□□ -1.31
Usp4P35123 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.86□□□□□ -1.31
Usp4P35123 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Gm6195-201ENSMUST00000063059 357 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp4P35123 Gm24036-201ENSMUST00000082868 156 ntBASIC6.86□□□□□ -1.31
Usp4P35123 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Usp4P35123 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Usp4P35123 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Usp4P35123 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp4P35123 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp4P35123 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Usp4P35123 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.86□□□□□ -1.31
Usp4P35123 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp4P35123 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Usp4P35123 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms