Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Cd28P31041 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cd28P31041 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cd28P31041 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cd28P31041 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cd28P31041 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cd28P31041 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cd28P31041 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Cd28P31041 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.16□□□□□ -1.58
Cd28P31041 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Cd28P31041 Gm10568-201ENSMUST00000193244 1634 ntBASIC5.15□□□□□ -1.58
Cd28P31041 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cd28P31041 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.15□□□□□ -1.58
Cd28P31041 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.15□□□□□ -1.58
Cd28P31041 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
Cd28P31041 Gm22714-201ENSMUST00000116894 78 ntBASIC5.15□□□□□ -1.59
Cd28P31041 Zfp389-201ENSMUST00000118425 675 ntBASIC5.15□□□□□ -1.59
Cd28P31041 Gm12400-201ENSMUST00000120915 1003 ntBASIC5.15□□□□□ -1.59
Cd28P31041 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.15□□□□□ -1.59
Cd28P31041 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cd28P31041 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cd28P31041 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.15□□□□□ -1.59
Cd28P31041 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cd28P31041 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cd28P31041 Gm18427-201ENSMUST00000195422 515 ntBASIC5.15□□□□□ -1.59
Cd28P31041 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cd28P31041 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC5.15□□□□□ -1.59
Cd28P31041 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cd28P31041 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.15□□□□□ -1.59
Cd28P31041 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
Cd28P31041 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.15□□□□□ -1.59
Cd28P31041 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.15□□□□□ -1.59
Cd28P31041 Gm18103-201ENSMUST00000216621 779 ntBASIC5.15□□□□□ -1.59
Cd28P31041 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cd28P31041 Gm19186-201ENSMUST00000219922 333 ntBASIC5.15□□□□□ -1.59
Cd28P31041 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cd28P31041 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cd28P31041 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cd28P31041 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cd28P31041 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
Cd28P31041 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
Cd28P31041 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cd28P31041 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.15□□□□□ -1.59
Cd28P31041 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cd28P31041 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cd28P31041 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.14□□□□□ -1.59
Cd28P31041 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cd28P31041 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.14□□□□□ -1.59
Cd28P31041 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Cd28P31041 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cd28P31041 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cd28P31041 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cd28P31041 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cd28P31041 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cd28P31041 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cd28P31041 Gm10936-201ENSMUST00000105264 252 ntBASIC5.14□□□□□ -1.59
Cd28P31041 Gm12813-201ENSMUST00000119615 902 ntBASIC5.14□□□□□ -1.59
Cd28P31041 Gm12308-201ENSMUST00000120440 389 ntBASIC5.14□□□□□ -1.59
Cd28P31041 Gm7613-201ENSMUST00000139070 487 ntBASIC5.14□□□□□ -1.59
Cd28P31041 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cd28P31041 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC5.14□□□□□ -1.59
Cd28P31041 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.14□□□□□ -1.59
Cd28P31041 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.14□□□□□ -1.59
Cd28P31041 Gm9285-201ENSMUST00000177691 697 ntBASIC5.14□□□□□ -1.59
Cd28P31041 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.14□□□□□ -1.59
Cd28P31041 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC5.14□□□□□ -1.59
Cd28P31041 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC5.14□□□□□ -1.59
Cd28P31041 Gm28455-201ENSMUST00000189105 1290 ntBASIC5.14□□□□□ -1.59
Cd28P31041 Gm37784-201ENSMUST00000193233 189 ntBASIC5.14□□□□□ -1.59
Cd28P31041 Gm37341-201ENSMUST00000194680 371 ntBASIC5.14□□□□□ -1.59
Cd28P31041 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.14□□□□□ -1.59
Cd28P31041 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC5.14□□□□□ -1.59
Cd28P31041 Gm8863-201ENSMUST00000216630 926 ntBASIC5.14□□□□□ -1.59
Cd28P31041 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.14□□□□□ -1.59
Cd28P31041 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cd28P31041 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC5.14□□□□□ -1.59
Cd28P31041 Gm6104-201ENSMUST00000078030 603 ntBASIC5.14□□□□□ -1.59
Cd28P31041 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.14□□□□□ -1.59
Cd28P31041 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Cd28P31041 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.14□□□□□ -1.59
Cd28P31041 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cd28P31041 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cd28P31041 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cd28P31041 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cd28P31041 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Cd28P31041 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cd28P31041 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Cd28P31041 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cd28P31041 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.13□□□□□ -1.59
Cd28P31041 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Cd28P31041 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cd28P31041 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.13□□□□□ -1.59
Cd28P31041 Gm11799-201ENSMUST00000116110 460 ntBASIC5.13□□□□□ -1.59
Cd28P31041 Gm7599-201ENSMUST00000121453 796 ntBASIC5.13□□□□□ -1.59
Cd28P31041 Gm12451-201ENSMUST00000121636 633 ntBASIC5.13□□□□□ -1.59
Cd28P31041 Gm12175-201ENSMUST00000122081 345 ntBASIC5.13□□□□□ -1.59
Cd28P31041 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.13□□□□□ -1.59
Cd28P31041 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.13□□□□□ -1.59
Cd28P31041 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cd28P31041 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms