Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Col2a1P28481 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.86□□□□□ -1.31
Col2a1P28481 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Col2a1P28481 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Col2a1P28481 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Col2a1P28481 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.86□□□□□ -1.31
Col2a1P28481 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.86□□□□□ -1.31
Col2a1P28481 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC6.86□□□□□ -1.31
Col2a1P28481 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Col2a1P28481 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.86□□□□□ -1.31
Col2a1P28481 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col2a1P28481 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm15660-201ENSMUST00000118997 478 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Gm12482-201ENSMUST00000120435 630 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Gm8545-201ENSMUST00000120692 801 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm26167-201ENSMUST00000158423 253 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.85□□□□□ -1.31
Col2a1P28481 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm22917-201ENSMUST00000180116 110 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Gm8581-201ENSMUST00000188636 890 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm43456-201ENSMUST00000202519 457 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 AC102287.1-201ENSMUST00000211412 454 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Gm7042-201ENSMUST00000223027 384 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 AC125543.4-201ENSMUST00000223385 117 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Gm5087-204ENSMUST00000225820 645 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Col2a1P28481 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Col2a1P28481 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm14335-201ENSMUST00000119165 810 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Gm13245-201ENSMUST00000119646 260 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Gm12768-201ENSMUST00000120055 759 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Gm14679-201ENSMUST00000121536 722 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Gm18343-201ENSMUST00000172802 604 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Mir3095-201ENSMUST00000175552 87 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm43779-201ENSMUST00000196691 829 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm43054-201ENSMUST00000199495 884 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC6.85□□□□□ -1.31
Col2a1P28481 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.85□□□□□ -1.31
Col2a1P28481 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm18409-202ENSMUST00000220105 529 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC6.85□□□□□ -1.31
Col2a1P28481 Gm18618-201ENSMUST00000222211 473 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 CT009600.1-201ENSMUST00000228771 337 ntBASIC6.85□□□□□ -1.31
Col2a1P28481 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Col2a1P28481 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms