Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm29781-201ENSMUST00000203862 478 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Klra13-ps-203ENSMUST00000204367 850 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm6702-201ENSMUST00000208496 471 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC4.88□□□□□ -1.63
Sdc1P18828 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC4.88□□□□□ -1.63
Sdc1P18828 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC4.88□□□□□ -1.63
Sdc1P18828 AC154851.1-201ENSMUST00000221591 655 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 AC154527.1-201ENSMUST00000225809 242 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 AC124395.1-201ENSMUST00000225940 707 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Sdc1P18828 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Sdc1P18828 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Sdc1P18828 Zfp865-202ENSMUST00000076791 1129 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
Sdc1P18828 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Sdc1P18828 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Sdc1P18828 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC4.88□□□□□ -1.63
Sdc1P18828 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm7690-201ENSMUST00000190885 1399 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm38085-201ENSMUST00000195785 3062 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Sdc1P18828 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Sdc1P18828 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 AL670757.1-201ENSMUST00000223668 1959 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC4.87□□□□□ -1.63
Sdc1P18828 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Sdc1P18828 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Gm37470-201ENSMUST00000193378 2798 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Sdc1P18828 Gm26422-201ENSMUST00000104276 132 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Gm7129-201ENSMUST00000117402 997 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Gm14610-201ENSMUST00000118358 966 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Gm11504-201ENSMUST00000120211 173 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Gm12903-201ENSMUST00000121015 544 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Gm3810-201ENSMUST00000122413 476 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC4.87□□□□□ -1.63
Sdc1P18828 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
Sdc1P18828 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
Sdc1P18828 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Sdc1P18828 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC4.87□□□□□ -1.63
Sdc1P18828 Gm29551-201ENSMUST00000190913 698 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Gm36994-201ENSMUST00000192941 492 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC4.87□□□□□ -1.63
Sdc1P18828 Gm7631-201ENSMUST00000196935 1100 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC4.87□□□□□ -1.63
Sdc1P18828 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Sdc1P18828 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Gm32983-201ENSMUST00000208500 505 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC4.87□□□□□ -1.63
Sdc1P18828 AC154450.1-201ENSMUST00000220911 485 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 AC105407.1-201ENSMUST00000225684 614 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 AC161383.1-201ENSMUST00000227356 527 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Sdc1P18828 Gm6436-201ENSMUST00000077163 451 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Gm22300-201ENSMUST00000082661 126 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Gm19113-201ENSMUST00000217552 1828 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
Sdc1P18828 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Sdc1P18828 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Sdc1P18828 Gm44289-201ENSMUST00000204144 1390 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Sdc1P18828 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Gm12057-201ENSMUST00000117244 1427 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Gm45360-201ENSMUST00000210698 1405 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms