Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm37212-201ENSMUST00000192582 3650 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Lire1P11260 Gm26340-201ENSMUST00000102365 99 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.42
Lire1P11260 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Gm11341-201ENSMUST00000122316 447 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Gm23430-201ENSMUST00000122490 314 ntBASIC6.15□□□□□ -1.42
Lire1P11260 BC064078-201ENSMUST00000122939 570 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.15□□□□□ -1.42
Lire1P11260 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Lire1P11260 Gm26354-201ENSMUST00000158221 129 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Gm21909-201ENSMUST00000178260 439 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Gm27602-201ENSMUST00000183861 111 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Gm19086-201ENSMUST00000190772 665 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Gm37503-201ENSMUST00000192088 319 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Gm7804-202ENSMUST00000194187 854 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Gm20128-201ENSMUST00000196189 417 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Gm44342-201ENSMUST00000196874 129 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Gm44383-201ENSMUST00000198940 129 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.15□□□□□ -1.42
Lire1P11260 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lire1P11260 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Gm45739-201ENSMUST00000213094 388 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Gm8911-201ENSMUST00000213986 652 ntBASIC6.15□□□□□ -1.42
Lire1P11260 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.15□□□□□ -1.42
Lire1P11260 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lire1P11260 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
Lire1P11260 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.15□□□□□ -1.43
Lire1P11260 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.15□□□□□ -1.43
Lire1P11260 Gm37060-201ENSMUST00000194997 2397 ntBASIC6.15□□□□□ -1.43
Lire1P11260 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Lire1P11260 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Lire1P11260 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.15□□□□□ -1.43
Lire1P11260 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.15□□□□□ -1.43
Lire1P11260 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Lire1P11260 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC6.15□□□□□ -1.43
Lire1P11260 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
Lire1P11260 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Lire1P11260 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Lire1P11260 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
Lire1P11260 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Lire1P11260 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lire1P11260 Mir697-201ENSMUST00000102316 109 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Lire1P11260 Gm14772-201ENSMUST00000116562 514 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.14□□□□□ -1.43
Lire1P11260 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Gm4992-201ENSMUST00000120256 768 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Gm11472-201ENSMUST00000121305 556 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Gm15152-201ENSMUST00000121540 394 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.14□□□□□ -1.43
Lire1P11260 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lire1P11260 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC6.14□□□□□ -1.43
Lire1P11260 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lire1P11260 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC6.14□□□□□ -1.43
Lire1P11260 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC6.14□□□□□ -1.43
Lire1P11260 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lire1P11260 Gm24286-201ENSMUST00000157632 128 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Gm27186-201ENSMUST00000184223 307 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.14□□□□□ -1.43
Lire1P11260 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lire1P11260 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lire1P11260 Gm28413-201ENSMUST00000189369 291 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC6.14□□□□□ -1.43
Lire1P11260 Gm37241-201ENSMUST00000191736 523 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Gm3511-201ENSMUST00000199823 204 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Gm18839-201ENSMUST00000204292 670 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Gm44565-201ENSMUST00000208194 269 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.14□□□□□ -1.43
Lire1P11260 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lire1P11260 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.14□□□□□ -1.43
Lire1P11260 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.14□□□□□ -1.43
Lire1P11260 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lire1P11260 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lire1P11260 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Lire1P11260 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lire1P11260 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lire1P11260 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Lire1P11260 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lire1P11260 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Lire1P11260 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
Lire1P11260 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lire1P11260 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lire1P11260 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms