Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm13333-201ENSMUST00000119424 781 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC7.11□□□□□ -1.27
Col1a1P11087 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC7.11□□□□□ -1.27
Col1a1P11087 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC7.11□□□□□ -1.27
Col1a1P11087 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col1a1P11087 Ear-ps5-201ENSMUST00000164700 463 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Gm17142-201ENSMUST00000164933 645 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Gm20480-201ENSMUST00000173953 250 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Gm29111-201ENSMUST00000188823 696 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col1a1P11087 Gm28188-201ENSMUST00000190483 236 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Gm28584-201ENSMUST00000191489 696 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC7.11□□□□□ -1.27
Col1a1P11087 Gm38138-201ENSMUST00000193274 696 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Gm37991-201ENSMUST00000194297 696 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Gm43744-201ENSMUST00000196387 688 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC7.11□□□□□ -1.27
Col1a1P11087 Gm4587-201ENSMUST00000209135 637 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col1a1P11087 AC124445.1-201ENSMUST00000218613 452 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 AC123665.4-201ENSMUST00000228790 249 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Gm5229-201ENSMUST00000039375 354 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Col1a1P11087 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col1a1P11087 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Col1a1P11087 Gm43707-201ENSMUST00000196451 3187 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Gm43745-201ENSMUST00000198085 1883 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col1a1P11087 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col1a1P11087 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Col1a1P11087 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Col1a1P11087 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col1a1P11087 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Col1a1P11087 Gm18313-201ENSMUST00000221036 1784 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
Col1a1P11087 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Col1a1P11087 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col1a1P11087 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col1a1P11087 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col1a1P11087 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col1a1P11087 Ear-ps2-201ENSMUST00000100689 466 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Gm13770-201ENSMUST00000117149 305 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col1a1P11087 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC7.11□□□□□ -1.27
Col1a1P11087 Gm24359-201ENSMUST00000158418 221 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC7.11□□□□□ -1.27
Col1a1P11087 Gm18969-201ENSMUST00000189423 730 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Gm32158-201ENSMUST00000200135 404 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Gm18422-201ENSMUST00000203663 1032 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC7.11□□□□□ -1.27
Col1a1P11087 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col1a1P11087 AC117797.1-201ENSMUST00000223977 695 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Mir484-201ENSMUST00000093566 67 ntBASIC7.11□□□□□ -1.27
Col1a1P11087 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col1a1P11087 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC7.1□□□□□ -1.27
Col1a1P11087 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.1□□□□□ -1.27
Col1a1P11087 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
Col1a1P11087 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Gm37347-201ENSMUST00000193969 3071 ntBASIC7.1□□□□□ -1.27
Col1a1P11087 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.1□□□□□ -1.27
Col1a1P11087 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
Col1a1P11087 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Col1a1P11087 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC7.1□□□□□ -1.27
Col1a1P11087 AC122357.3-201ENSMUST00000221260 2293 ntBASIC7.1□□□□□ -1.27
Col1a1P11087 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.1□□□□□ -1.27
Col1a1P11087 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Col1a1P11087 Gm37367-201ENSMUST00000191771 2602 ntBASIC7.1□□□□□ -1.27
Col1a1P11087 Gm38451-201ENSMUST00000208329 2646 ntBASIC7.1□□□□□ -1.27
Col1a1P11087 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC7.1□□□□□ -1.27
Col1a1P11087 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Gm13007-201ENSMUST00000121866 365 ntBASIC7.1□□□□□ -1.27
Col1a1P11087 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC7.1□□□□□ -1.27
Col1a1P11087 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC7.1□□□□□ -1.27
Col1a1P11087 Gm18728-201ENSMUST00000186155 753 ntBASIC7.1□□□□□ -1.27
Col1a1P11087 Gm28428-201ENSMUST00000188886 697 ntBASIC7.1□□□□□ -1.27
Col1a1P11087 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC7.1□□□□□ -1.27
Col1a1P11087 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC7.1□□□□□ -1.27
Col1a1P11087 Gm44330-201ENSMUST00000200106 143 ntBASIC7.1□□□□□ -1.27
Col1a1P11087 Gm8039-201ENSMUST00000204758 712 ntBASIC7.1□□□□□ -1.27
Col1a1P11087 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC7.1□□□□□ -1.27
Col1a1P11087 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC7.1□□□□□ -1.27
Col1a1P11087 Gm6049-201ENSMUST00000222369 458 ntBASIC7.1□□□□□ -1.27
Col1a1P11087 AC126554.2-201ENSMUST00000223259 400 ntBASIC7.1□□□□□ -1.27
Col1a1P11087 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms