Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.54□□□□□ -1.36
Clip3B9EHT4 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.54□□□□□ -1.36
Clip3B9EHT4 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Clip3B9EHT4 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clip3B9EHT4 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Clip3B9EHT4 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Clip3B9EHT4 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.54□□□□□ -1.36
Clip3B9EHT4 Gm42736-201ENSMUST00000200723 1353 ntBASIC6.54□□□□□ -1.36
Clip3B9EHT4 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Clip3B9EHT4 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Clip3B9EHT4 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm42615-201ENSMUST00000197704 1820 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm25647-201ENSMUST00000101832 78 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm25823-201ENSMUST00000101995 78 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm26146-201ENSMUST00000104478 185 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm12713-201ENSMUST00000118404 764 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm24220-201ENSMUST00000177753 79 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm25988-201ENSMUST00000177759 79 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm23471-201ENSMUST00000177886 79 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm26488-201ENSMUST00000178225 79 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm23449-201ENSMUST00000179208 79 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm25221-201ENSMUST00000180051 79 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm26595-201ENSMUST00000181585 484 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm29156-201ENSMUST00000187764 499 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm28413-201ENSMUST00000189369 291 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm7867-201ENSMUST00000189856 546 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm36997-201ENSMUST00000195090 707 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm43212-201ENSMUST00000198208 394 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm44227-201ENSMUST00000203576 241 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm44411-201ENSMUST00000204172 349 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm18996-201ENSMUST00000214851 755 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 AC116589.4-201ENSMUST00000222390 216 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Clip3B9EHT4 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.53□□□□□ -1.36
Clip3B9EHT4 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.52□□□□□ -1.36
Clip3B9EHT4 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm13058-201ENSMUST00000117097 1435 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm8569-201ENSMUST00000117630 647 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms