Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm14871-201ENSMUST00000119056 194 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm12808-201ENSMUST00000120597 404 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm16060-201ENSMUST00000153140 478 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Vis1-201ENSMUST00000183957 201 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm37082-201ENSMUST00000192629 1927 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gm13033-201ENSMUST00000117591 1057 ntBASIC6.25□□□□□ -1.41
Col4a6B1AVK5 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gm22355-201ENSMUST00000175531 96 ntBASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gm28066-201ENSMUST00000188657 472 ntBASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gm28507-201ENSMUST00000189737 703 ntBASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gm18407-201ENSMUST00000192126 790 ntBASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gm8039-201ENSMUST00000204758 712 ntBASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gm8523-201ENSMUST00000211386 552 ntBASIC6.25□□□□□ -1.41
Col4a6B1AVK5 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gm10540-201ENSMUST00000097581 276 ntBASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.25□□□□□ -1.41
Col4a6B1AVK5 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.25□□□□□ -1.41
Col4a6B1AVK5 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a6B1AVK5 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Gm14388-201ENSMUST00000118119 477 ntBASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Gm23546-201ENSMUST00000158211 137 ntBASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Gm23774-201ENSMUST00000158990 131 ntBASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Gm15838-201ENSMUST00000161575 180 ntBASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Gm18800-202ENSMUST00000188688 1105 ntBASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Gm29111-201ENSMUST00000188823 696 ntBASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Gm28584-201ENSMUST00000191489 696 ntBASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Gm38138-201ENSMUST00000193274 696 ntBASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Gm37991-201ENSMUST00000194297 696 ntBASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Gm37308-201ENSMUST00000194684 100 ntBASIC6.24□□□□□ -1.41
Col4a6B1AVK5 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Gm19174-201ENSMUST00000216944 956 ntBASIC6.24□□□□□ -1.41
Col4a6B1AVK5 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 AC124408.2-201ENSMUST00000228168 645 ntBASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Gm10064-201ENSMUST00000071235 399 ntBASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Col4a6B1AVK5 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms