Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Mir331-201ENSMUST00000083673 96 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm6820-201ENSMUST00000188803 2173 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm44863-201ENSMUST00000207613 1422 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm14970-201ENSMUST00000122289 355 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Mir6926-201ENSMUST00000184562 68 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm29596-201ENSMUST00000185710 385 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm8920-201ENSMUST00000196153 924 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 AC163660.1-201ENSMUST00000223696 818 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 AV026068-231ENSMUST00000225862 482 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col6a4A2AX52 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Col6a4A2AX52 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm44215-201ENSMUST00000204910 2711 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm26078-201ENSMUST00000104067 128 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm14175-201ENSMUST00000119835 241 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm26372-201ENSMUST00000157831 236 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm8667-201ENSMUST00000211112 449 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 CT030254.1-201ENSMUST00000225450 1078 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm10845-202ENSMUST00000228217 3389 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Mir92b-201ENSMUST00000102300 83 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm13604-201ENSMUST00000119332 482 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm8545-201ENSMUST00000120692 801 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm26172-201ENSMUST00000158421 134 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Mir6963-201ENSMUST00000183535 71 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Mir219c-201ENSMUST00000199860 60 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm44982-201ENSMUST00000208795 471 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm5080-201ENSMUST00000220341 743 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC5.11□□□□□ -1.59
Col6a4A2AX52 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms