Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Gm3550W4VSN7 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Gm3550W4VSN7 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Gm3550W4VSN7 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.13□□□□□ -1.59
Gm3550W4VSN7 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Gm3550W4VSN7 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.13□□□□□ -1.59
Gm3550W4VSN7 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.13□□□□□ -1.59
Gm3550W4VSN7 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.13□□□□□ -1.59
Gm3550W4VSN7 AC158595.1-201ENSMUST00000217989 1435 ntBASIC5.13□□□□□ -1.59
Gm3550W4VSN7 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Gm3550W4VSN7 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Gm3550W4VSN7 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.13□□□□□ -1.59
Gm3550W4VSN7 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Gm3550W4VSN7 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.13□□□□□ -1.59
Gm3550W4VSN7 AC130831.1-201ENSMUST00000224546 1474 ntBASIC5.13□□□□□ -1.59
Gm3550W4VSN7 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.13□□□□□ -1.59
Gm3550W4VSN7 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Gm3550W4VSN7 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Gm3550W4VSN7 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Gm3550W4VSN7 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Gm12939-201ENSMUST00000117303 165 ntBASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Gm12369-201ENSMUST00000121343 942 ntBASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Gm15164-201ENSMUST00000122203 271 ntBASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Mir1953-201ENSMUST00000157866 89 ntBASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Gm16269-201ENSMUST00000160532 409 ntBASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Gm5947-201ENSMUST00000179156 714 ntBASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Gm5645-201ENSMUST00000179597 714 ntBASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Gm5318-201ENSMUST00000205249 406 ntBASIC5.12□□□□□ -1.59
Gm3550W4VSN7 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 CT010431.1-201ENSMUST00000221249 1080 ntBASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Glycam1-204ENSMUST00000228895 641 ntBASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.12□□□□□ -1.59
Gm3550W4VSN7 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Gm3550W4VSN7 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.11□□□□□ -1.59
Gm3550W4VSN7 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Gm22284-201ENSMUST00000104132 132 ntBASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Gm11617-201ENSMUST00000119609 639 ntBASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Gm6977-201ENSMUST00000121568 512 ntBASIC5.11□□□□□ -1.59
Gm3550W4VSN7 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3550W4VSN7 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Gm22214-201ENSMUST00000157563 172 ntBASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Gm6541-201ENSMUST00000165542 561 ntBASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Gm20637-201ENSMUST00000175715 462 ntBASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Gm26557-201ENSMUST00000180756 493 ntBASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Gm29111-201ENSMUST00000188823 696 ntBASIC5.11□□□□□ -1.59
Gm3550W4VSN7 Gm28584-201ENSMUST00000191489 696 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 112.7 ms