Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm7212-201ENSMUST00000120817 348 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm23343-201ENSMUST00000158964 143 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm17511-201ENSMUST00000172206 342 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm23617-201ENSMUST00000175410 95 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm18700-201ENSMUST00000185791 553 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm3321-201ENSMUST00000200603 1129 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm2996-201ENSMUST00000211398 537 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm11360-201ENSMUST00000221898 262 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 AC140393.3-201ENSMUST00000228396 1352 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm22103-201ENSMUST00000116733 121 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm26475-201ENSMUST00000116769 121 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm23620-201ENSMUST00000116812 121 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm25042-201ENSMUST00000116856 121 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm25540-201ENSMUST00000116880 121 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm12565-201ENSMUST00000119004 649 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm12438-201ENSMUST00000122034 336 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm23550-201ENSMUST00000179003 121 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm25123-201ENSMUST00000179154 121 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm25353-201ENSMUST00000179366 121 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm22992-201ENSMUST00000179496 121 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm25892-201ENSMUST00000179867 121 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm24092-201ENSMUST00000180257 121 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Mir6989-201ENSMUST00000184812 65 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm29464-201ENSMUST00000187692 513 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm8860-201ENSMUST00000193160 445 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm5694-201ENSMUST00000195648 641 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm29778-201ENSMUST00000201667 466 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm7492-201ENSMUST00000201745 725 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 AV026068-220ENSMUST00000224153 1147 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 CT025579.4-201ENSMUST00000224598 627 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 AC154250.1-201ENSMUST00000224775 489 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim3Q9R1R2 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 170 ms