Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm16330-201ENSMUST00000128324 297 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm6434-201ENSMUST00000163316 372 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm18802-201ENSMUST00000186270 888 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm37380-201ENSMUST00000193752 397 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Ighv1-21-201ENSMUST00000194856 351 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm43774-201ENSMUST00000196327 878 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm8454-201ENSMUST00000196980 811 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm42464-202ENSMUST00000198111 774 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm45474-201ENSMUST00000209471 408 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm8106-201ENSMUST00000213123 523 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm7780-201ENSMUST00000214787 406 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 AC159622.1-201ENSMUST00000221004 554 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 AC115357.1-201ENSMUST00000227575 466 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Cma2-202ENSMUST00000228263 857 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 BC023105-201ENSMUST00000073997 1227 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm9836-201ENSMUST00000117132 216 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm12842-201ENSMUST00000117298 476 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm15719-201ENSMUST00000120619 635 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm11689-201ENSMUST00000120766 302 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm5578-201ENSMUST00000121490 1236 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm8089-201ENSMUST00000122463 968 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm25435-201ENSMUST00000158277 267 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm28023-201ENSMUST00000184556 60 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm27825-201ENSMUST00000184586 60 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm28859-201ENSMUST00000186650 616 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm33571-201ENSMUST00000193271 657 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm42799-201ENSMUST00000201331 328 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm45196-201ENSMUST00000206751 825 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm5324-201ENSMUST00000208115 476 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm2961-201ENSMUST00000211074 772 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 AC131033.1-201ENSMUST00000228223 279 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
Ddx56Q9D0R4 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms