Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Gm16269-201ENSMUST00000160532 409 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Gm6541-201ENSMUST00000165542 561 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Mir7005-201ENSMUST00000185089 69 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Ighv1-21-201ENSMUST00000194856 351 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Gm9057-201ENSMUST00000198791 296 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Gm45156-201ENSMUST00000207255 439 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Gm19324-201ENSMUST00000213229 1169 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Gm2614-201ENSMUST00000223227 403 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 AC157572.1-201ENSMUST00000227187 825 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Gm10705-201ENSMUST00000098980 461 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Lsm1Q8VC85 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm13811-201ENSMUST00000117800 256 ntBASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm25281-201ENSMUST00000157270 104 ntBASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm43354-201ENSMUST00000196862 346 ntBASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 CT009713.1-201ENSMUST00000224828 853 ntBASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 AC132465.1-201ENSMUST00000219938 1307 ntBASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Naip3-201ENSMUST00000118082 4208 ntBASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Lsm1Q8VC85 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm37953-201ENSMUST00000195293 1884 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms