Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Clrn1Q8K445 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
Clrn1Q8K445 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 CT010453.1-201ENSMUST00000226795 2201 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Mir674-201ENSMUST00000102421 100 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm26079-201ENSMUST00000104066 133 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm25344-201ENSMUST00000104503 132 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm13983-201ENSMUST00000118018 865 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm4992-201ENSMUST00000120256 768 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Mir1903-201ENSMUST00000122574 80 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm24962-201ENSMUST00000157917 109 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm11107-201ENSMUST00000165414 505 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm3585-201ENSMUST00000173438 875 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm20691-201ENSMUST00000176889 333 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm8609-201ENSMUST00000182967 998 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm37620-201ENSMUST00000192910 501 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm43160-201ENSMUST00000196453 421 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm7463-201ENSMUST00000201541 547 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm44896-201ENSMUST00000206190 772 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 AC147101.1-201ENSMUST00000217964 312 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm22043-201ENSMUST00000082993 158 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.24□□□□□ -1.41
Clrn1Q8K445 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Clrn1Q8K445 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 AC125095.1-201ENSMUST00000228387 2020 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 AC169038.1-201ENSMUST00000227378 1352 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clrn1Q8K445 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm11553-201ENSMUST00000120682 240 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm12444-201ENSMUST00000121512 877 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm25281-201ENSMUST00000157270 104 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm5456-201ENSMUST00000170706 844 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm17045-201ENSMUST00000178600 844 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms