Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm18529-201ENSMUST00000193025 1257 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm8860-201ENSMUST00000193160 445 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 AC121137.1-201ENSMUST00000225272 602 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 AC122290.1-201ENSMUST00000225631 1078 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 AC129537.1-201ENSMUST00000226596 1228 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Olfr1160-201ENSMUST00000099839 960 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm37106-201ENSMUST00000193760 1532 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 AC159244.3-201ENSMUST00000222887 3153 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm37925-201ENSMUST00000195352 4255 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 AC153729.1-201ENSMUST00000214055 2562 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm44043-201ENSMUST00000203426 3253 ntBASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm10062-201ENSMUST00000072180 1470 ntBASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm14375-201ENSMUST00000119490 855 ntBASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm17091-201ENSMUST00000163248 357 ntBASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm17149-201ENSMUST00000164712 375 ntBASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm22701-201ENSMUST00000175371 291 ntBASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm29385-201ENSMUST00000186831 363 ntBASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm8641-201ENSMUST00000186995 826 ntBASIC7.44□□□□□ -1.22
Brf1Q8CFK2 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm37533-201ENSMUST00000193848 545 ntBASIC7.44□□□□□ -1.22
Brf1Q8CFK2 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm43436-201ENSMUST00000199308 147 ntBASIC7.44□□□□□ -1.22
Brf1Q8CFK2 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC7.44□□□□□ -1.22
Brf1Q8CFK2 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Olfr844-201ENSMUST00000054106 930 ntBASIC7.44□□□□□ -1.22
Brf1Q8CFK2 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Gm4991-201ENSMUST00000118899 1552 ntBASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brf1Q8CFK2 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm22952-201ENSMUST00000116720 120 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm14331-201ENSMUST00000120396 409 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm24369-201ENSMUST00000175387 96 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm18006-201ENSMUST00000177411 662 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm24300-201ENSMUST00000177809 109 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm24017-201ENSMUST00000178726 109 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms