Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gm45117-201ENSMUST00000207250 1774 ntBASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gm6446-201ENSMUST00000120604 818 ntBASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gm22235-201ENSMUST00000157085 110 ntBASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gm8919-201ENSMUST00000182028 1014 ntBASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gm29650-201ENSMUST00000188485 742 ntBASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gm38018-201ENSMUST00000195651 540 ntBASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gm44770-201ENSMUST00000205395 1264 ntBASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gm2225-201ENSMUST00000209570 377 ntBASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.33□□□□□ -1.24
Vps53Q8CCB4 AC122290.1-201ENSMUST00000225631 1078 ntBASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC7.33□□□□□ -1.24
Vps53Q8CCB4 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Vps53Q8CCB4 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm26422-201ENSMUST00000104276 132 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm25346-201ENSMUST00000104509 128 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm13400-201ENSMUST00000117436 380 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm14712-201ENSMUST00000120195 772 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm7350-201ENSMUST00000120964 636 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm23225-201ENSMUST00000158121 114 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm25374-201ENSMUST00000158158 101 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm16557-201ENSMUST00000159182 191 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm2058-201ENSMUST00000178791 560 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm6055-201ENSMUST00000180532 378 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm44361-201ENSMUST00000197960 94 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm18422-201ENSMUST00000203663 1032 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 AC105169.1-201ENSMUST00000218912 1294 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm19095-201ENSMUST00000220533 730 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 CT025598.1-201ENSMUST00000225140 427 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 AC116950.1-201ENSMUST00000226322 3250 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm43031-201ENSMUST00000198500 1887 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Gm45520-201ENSMUST00000210109 2031 ntBASIC7.32□□□□□ -1.24
Vps53Q8CCB4 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Vps53Q8CCB4 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm18716-201ENSMUST00000204507 1603 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm12262-201ENSMUST00000119915 305 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm14587-201ENSMUST00000121714 658 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms