Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm42568-201ENSMUST00000195639 1841 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm26078-201ENSMUST00000104067 128 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm13566-201ENSMUST00000117428 1142 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm8545-201ENSMUST00000120692 801 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Mir5103-201ENSMUST00000175111 79 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm13887-201ENSMUST00000119009 344 ntBASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm14871-201ENSMUST00000119056 194 ntBASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm12936-201ENSMUST00000121439 301 ntBASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm6068-201ENSMUST00000222270 387 ntBASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 AC154461.6-201ENSMUST00000224815 2630 ntBASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm42490-201ENSMUST00000198595 2064 ntBASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 AU020206-202ENSMUST00000206358 3009 ntBASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm38381-201ENSMUST00000193594 2275 ntBASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm11197-201ENSMUST00000145158 839 ntBASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm16060-201ENSMUST00000153140 478 ntBASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm23224-201ENSMUST00000158122 271 ntBASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm9480-201ENSMUST00000198038 616 ntBASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 CT030175.1-201ENSMUST00000220822 408 ntBASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Col6a6Q8C6K9 Gm42440-201ENSMUST00000197906 2284 ntBASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm34294-201ENSMUST00000191912 4263 ntBASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm43014-201ENSMUST00000198568 2443 ntBASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm28583-201ENSMUST00000188903 2141 ntBASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm13531-201ENSMUST00000121893 543 ntBASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms