Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm22771-201ENSMUST00000104449 91 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm25111-201ENSMUST00000116686 147 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm15021-201ENSMUST00000117832 742 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm11726-201ENSMUST00000121028 424 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm11692-201ENSMUST00000122121 902 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm22434-201ENSMUST00000158549 122 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm23025-201ENSMUST00000158769 111 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm7651-201ENSMUST00000173398 901 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm22702-201ENSMUST00000175372 69 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm26729-201ENSMUST00000180744 352 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Ighv1-30-201ENSMUST00000194082 349 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm42896-201ENSMUST00000201249 1113 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm44566-201ENSMUST00000207638 304 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm18860-201ENSMUST00000212029 764 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 AL591207.2-201ENSMUST00000222991 337 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 AC132317.2-201ENSMUST00000227301 519 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 n-R5s29-201ENSMUST00000082836 119 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm23516-201ENSMUST00000093728 107 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm43099-201ENSMUST00000198943 5241 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm37181-201ENSMUST00000192513 1727 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm43526-201ENSMUST00000196666 1565 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm15105-201ENSMUST00000117777 204 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm13690-201ENSMUST00000118989 285 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm11343-201ENSMUST00000120579 599 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm14766-201ENSMUST00000121689 367 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm23082-201ENSMUST00000157852 133 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm7420-201ENSMUST00000162836 842 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm23018-201ENSMUST00000177928 109 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm19200-201ENSMUST00000182579 1001 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Mir6921-201ENSMUST00000183719 80 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm27942-201ENSMUST00000184669 101 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Mir6769b-201ENSMUST00000184793 60 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm29369-201ENSMUST00000190674 615 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm43631-201ENSMUST00000202011 369 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm44147-201ENSMUST00000204658 94 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm6581-201ENSMUST00000214545 260 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 AC158803.2-201ENSMUST00000219452 679 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 AC158521.1-202ENSMUST00000224352 645 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 AC158521.1-201ENSMUST00000225295 660 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 AC154328.1-201ENSMUST00000225875 307 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 AC151730.1-201ENSMUST00000226106 448 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Mir138-2-201ENSMUST00000083578 71 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC8.06□□□□□ -1.12
Trim47Q8C0E3 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim47Q8C0E3 AC115891.1-201ENSMUST00000215798 1755 ntBASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 152.7 ms