Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm37072-201ENSMUST00000194570 837 ntBASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm45845-201ENSMUST00000207326 582 ntBASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm33178-201ENSMUST00000212090 257 ntBASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 AC154595.2-201ENSMUST00000225067 310 ntBASIC8.57□□□□□ -1.04
Usp40Q8BWR4 AC154527.1-201ENSMUST00000225809 242 ntBASIC8.57□□□□□ -1.04
Usp40Q8BWR4 AC166574.7-201ENSMUST00000228502 704 ntBASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Snora44-201ENSMUST00000082670 129 ntBASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Mir484-201ENSMUST00000093566 67 ntBASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm38070-201ENSMUST00000191850 6480 ntBASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm43022-201ENSMUST00000197067 4268 ntBASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 AC159002.2-201ENSMUST00000228843 4874 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm11885-201ENSMUST00000118473 1428 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 AC135669.2-201ENSMUST00000215636 4958 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 AC156636.2-201ENSMUST00000218845 4557 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm43637-201ENSMUST00000202206 2926 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm15103-201ENSMUST00000119893 871 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm13341-201ENSMUST00000120780 672 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Mir6992-201ENSMUST00000183342 109 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Mir7653-201ENSMUST00000184358 61 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm28428-201ENSMUST00000188886 697 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm7891-201ENSMUST00000190284 843 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm37241-201ENSMUST00000191736 523 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm37609-201ENSMUST00000191778 678 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Trav3n-2-201ENSMUST00000197693 334 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm42438-201ENSMUST00000197832 974 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm44382-201ENSMUST00000198683 122 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Trav3d-2-201ENSMUST00000199874 334 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm19174-201ENSMUST00000216944 956 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 CT030645.3-201ENSMUST00000225483 1022 ntBASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Usp40Q8BWR4 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Gm28011-201ENSMUST00000184097 175 ntBASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Gm28917-201ENSMUST00000187294 237 ntBASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Gm37187-201ENSMUST00000193425 341 ntBASIC8.55□□□□□ -1.04
Usp40Q8BWR4 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Gm46223-201ENSMUST00000215196 675 ntBASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Gm44039-201ENSMUST00000204192 2246 ntBASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Gm37090-201ENSMUST00000195694 4105 ntBASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms