Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm18618-201ENSMUST00000222211 473 ntBASIC6.27□□□□□ -1.41
Nup54Q8BTS4 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.27□□□□□ -1.41
Nup54Q8BTS4 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup54Q8BTS4 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Nup54Q8BTS4 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup54Q8BTS4 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup54Q8BTS4 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Nup54Q8BTS4 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup54Q8BTS4 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Nup54Q8BTS4 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Nup54Q8BTS4 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup54Q8BTS4 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Nup54Q8BTS4 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Nup54Q8BTS4 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm13772-201ENSMUST00000118431 317 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm15237-201ENSMUST00000122104 469 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm23954-201ENSMUST00000157213 353 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm24435-201ENSMUST00000157886 110 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm25013-201ENSMUST00000158402 128 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm18799-201ENSMUST00000189104 913 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm19182-201ENSMUST00000207139 577 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Nup54Q8BTS4 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Gm23440-201ENSMUST00000104299 130 ntBASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Gm7146-201ENSMUST00000116079 739 ntBASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Gm14382-201ENSMUST00000117374 437 ntBASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Gm13469-201ENSMUST00000118231 350 ntBASIC6.25□□□□□ -1.41
Nup54Q8BTS4 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Gm24735-201ENSMUST00000158859 118 ntBASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Gm24733-201ENSMUST00000158863 253 ntBASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Gm16164-201ENSMUST00000160078 468 ntBASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Gm27004-201ENSMUST00000183300 727 ntBASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Mir7685-201ENSMUST00000183555 62 ntBASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.25□□□□□ -1.41
Nup54Q8BTS4 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms