Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm22080-201ENSMUST00000157591 106 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm16026-205ENSMUST00000162923 641 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm17212-201ENSMUST00000166666 259 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Spanxn4-201ENSMUST00000172433 424 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm25640-201ENSMUST00000175378 125 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm18417-201ENSMUST00000176564 648 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm7426-201ENSMUST00000179046 404 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm5272-201ENSMUST00000182730 982 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm38281-201ENSMUST00000192301 315 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm4856-201ENSMUST00000192696 1091 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Ighv1-3-201ENSMUST00000192764 302 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm37288-201ENSMUST00000193963 334 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm43396-201ENSMUST00000197506 706 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm43203-201ENSMUST00000200130 558 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm36378-201ENSMUST00000201709 388 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 AC120011.1-201ENSMUST00000202147 744 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm20997-201ENSMUST00000205148 231 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm17918-201ENSMUST00000205315 574 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm45432-201ENSMUST00000210391 416 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm18655-201ENSMUST00000214802 1090 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm8275-201ENSMUST00000219732 424 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm44769-201ENSMUST00000206120 2809 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 AC159002.2-201ENSMUST00000228843 4874 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm14404-201ENSMUST00000119117 1660 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm37940-201ENSMUST00000194243 3251 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm45001-201ENSMUST00000208279 2515 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm43613-201ENSMUST00000199409 1613 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 AC122887.2-201ENSMUST00000219465 1603 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 AC153143.1-201ENSMUST00000222966 1340 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm14727-201ENSMUST00000118526 525 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm15316-201ENSMUST00000121082 421 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm14721-201ENSMUST00000121381 525 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm11882-201ENSMUST00000121463 506 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm2709-201ENSMUST00000142979 350 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm26323-201ENSMUST00000157743 175 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm6428-201ENSMUST00000161062 345 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm21839-201ENSMUST00000179536 378 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm9274-201ENSMUST00000182505 984 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm38022-201ENSMUST00000191762 403 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm17895-201ENSMUST00000194028 874 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm24826-202ENSMUST00000197298 216 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm43472-201ENSMUST00000200175 154 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm19617-201ENSMUST00000202977 308 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm34783-201ENSMUST00000209159 303 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm9604-201ENSMUST00000211175 433 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC7.05□□□□□ -1.28
Pcdh19Q80TF3 Gm18228-201ENSMUST00000217297 1091 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms