Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm3489-201ENSMUST00000190083 528 ntBASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm44137-201ENSMUST00000203670 367 ntBASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 AC153357.1-201ENSMUST00000219190 482 ntBASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 AC125190.2-201ENSMUST00000221160 497 ntBASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm10095-201ENSMUST00000222765 483 ntBASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm11105-201ENSMUST00000112781 478 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm15161-201ENSMUST00000117340 387 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm14356-201ENSMUST00000118322 869 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm14900-201ENSMUST00000120304 733 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm12396-201ENSMUST00000121600 306 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm11545-201ENSMUST00000146507 375 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm21772-201ENSMUST00000169213 478 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm17126-201ENSMUST00000172276 523 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Mir6362-201ENSMUST00000184329 107 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm8826-201ENSMUST00000193161 948 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Ighv5-19-201ENSMUST00000193466 297 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm37533-201ENSMUST00000193848 545 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm29745-201ENSMUST00000198005 687 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm42652-201ENSMUST00000199073 614 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm20586-201ENSMUST00000210122 547 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm7368-201ENSMUST00000213307 367 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm8863-201ENSMUST00000216630 926 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 AC165092.4-201ENSMUST00000225025 679 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Mir365-2-201ENSMUST00000083555 112 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm37090-201ENSMUST00000195694 4105 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm38124-201ENSMUST00000191710 2581 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 AC098728.1-202ENSMUST00000226656 2198 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gm44045-201ENSMUST00000204906 2520 ntBASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
Ddx55Q6ZPL9 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Ddx55Q6ZPL9 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.22□□□□□ -1.25
Ddx55Q6ZPL9 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ddx55Q6ZPL9 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ddx55Q6ZPL9 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ddx55Q6ZPL9 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Ddx55Q6ZPL9 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ddx55Q6ZPL9 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Ddx55Q6ZPL9 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ddx55Q6ZPL9 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ddx55Q6ZPL9 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Ddx55Q6ZPL9 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ddx55Q6ZPL9 Gm43279-201ENSMUST00000202376 2512 ntBASIC7.22□□□□□ -1.25
Ddx55Q6ZPL9 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ddx55Q6ZPL9 Gm43395-201ENSMUST00000198717 2240 ntBASIC7.22□□□□□ -1.25
Ddx55Q6ZPL9 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Ddx55Q6ZPL9 Gm14115-201ENSMUST00000119242 482 ntBASIC7.22□□□□□ -1.25
Ddx55Q6ZPL9 Gm13604-201ENSMUST00000119332 482 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms