Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm24709-201ENSMUST00000104123 132 ntBASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm15618-201ENSMUST00000121610 452 ntBASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm24435-201ENSMUST00000157886 110 ntBASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm5430-201ENSMUST00000182525 915 ntBASIC6.87□□□□□ -1.31
Usp49Q6P9L4 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm18700-201ENSMUST00000185791 553 ntBASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm5260-201ENSMUST00000186157 949 ntBASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm37809-201ENSMUST00000195050 931 ntBASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm6070-201ENSMUST00000207275 419 ntBASIC6.87□□□□□ -1.31
Usp49Q6P9L4 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.87□□□□□ -1.31
Usp49Q6P9L4 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC6.87□□□□□ -1.31
Usp49Q6P9L4 AC114572.1-201ENSMUST00000227262 300 ntBASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm25133-201ENSMUST00000082647 130 ntBASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.87□□□□□ -1.31
Usp49Q6P9L4 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 AC155710.1-201ENSMUST00000219913 1353 ntBASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm11902-201ENSMUST00000118849 270 ntBASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm16074-201ENSMUST00000119524 444 ntBASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm14331-201ENSMUST00000120396 409 ntBASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm12152-201ENSMUST00000122465 684 ntBASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm27998-201ENSMUST00000184902 361 ntBASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm29111-201ENSMUST00000188823 696 ntBASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm28584-201ENSMUST00000191489 696 ntBASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm38138-201ENSMUST00000193274 696 ntBASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm37991-201ENSMUST00000194297 696 ntBASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm7492-201ENSMUST00000201745 725 ntBASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm17994-201ENSMUST00000209260 533 ntBASIC6.86□□□□□ -1.31
Usp49Q6P9L4 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp49Q6P9L4 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Usp49Q6P9L4 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Usp49Q6P9L4 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Usp49Q6P9L4 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.85□□□□□ -1.31
Usp49Q6P9L4 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms