Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Gm22755-201ENSMUST00000157143 100 ntBASIC12.67□□□□□ -0.38
Trim41Q5NCC3 n-R5s93-201ENSMUST00000180091 119 ntBASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Gm27360-201ENSMUST00000183487 80 ntBASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Gm28596-201ENSMUST00000185870 696 ntBASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Gm32295-201ENSMUST00000192558 696 ntBASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Gm31260-201ENSMUST00000193478 696 ntBASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Gm43501-201ENSMUST00000202513 107 ntBASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Gm13058-201ENSMUST00000117097 1435 ntBASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Defa-ps1-201ENSMUST00000119062 282 ntBASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Defa-ps6-201ENSMUST00000122172 282 ntBASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Gm23212-201ENSMUST00000122718 60 ntBASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Olfr331-202ENSMUST00000170501 957 ntBASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Mir378d-201ENSMUST00000184232 110 ntBASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Gm18185-201ENSMUST00000186725 667 ntBASIC12.66□□□□□ -0.38
Trim41Q5NCC3 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 AC165292.1-201ENSMUST00000215218 620 ntBASIC12.66□□□□□ -0.38
Trim41Q5NCC3 AC116589.1-201ENSMUST00000220634 327 ntBASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Gm28651-202ENSMUST00000227968 2693 ntBASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Gm44797-201ENSMUST00000208780 1837 ntBASIC12.66□□□□□ -0.38
Trim41Q5NCC3 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim41Q5NCC3 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Gm8878-201ENSMUST00000173552 1725 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim41Q5NCC3 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Gm2178-201ENSMUST00000104927 357 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Gm14727-201ENSMUST00000118526 525 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Gm13224-201ENSMUST00000119586 94 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Gm13865-201ENSMUST00000120957 865 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Gm11321-201ENSMUST00000121257 902 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Gm14721-201ENSMUST00000121381 525 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Gm11254-201ENSMUST00000122368 653 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Mup-ps4-201ENSMUST00000151005 539 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Gm7634-201ENSMUST00000185778 553 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Gm19694-201ENSMUST00000192364 505 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Gm35108-201ENSMUST00000194321 699 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Gm36953-201ENSMUST00000195295 268 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Gm33191-201ENSMUST00000195604 699 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms