Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Grik1-210ENSMUST00000228034 2708 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Col8a1Q00780 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC5.96□□□□□ -1.45
Col8a1Q00780 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col8a1Q00780 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Col8a1Q00780 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm5903-201ENSMUST00000121836 2325 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm14931-201ENSMUST00000111079 253 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm12393-201ENSMUST00000117084 848 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm12842-201ENSMUST00000117298 476 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm15385-201ENSMUST00000118725 667 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm14018-201ENSMUST00000119042 455 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm14457-201ENSMUST00000148069 1161 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm23897-201ENSMUST00000158110 158 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm9064-201ENSMUST00000163579 566 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm9671-201ENSMUST00000171502 547 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm21758-201ENSMUST00000179336 819 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm5272-201ENSMUST00000182730 982 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm29413-201ENSMUST00000186019 880 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm28597-201ENSMUST00000187664 666 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm29639-201ENSMUST00000188375 580 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm29647-201ENSMUST00000188795 666 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm28337-201ENSMUST00000190425 666 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm28504-201ENSMUST00000190977 666 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm31511-201ENSMUST00000193134 657 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm35843-201ENSMUST00000193716 666 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm35108-201ENSMUST00000194321 699 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm33191-201ENSMUST00000195604 699 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm35212-201ENSMUST00000196672 606 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm19104-201ENSMUST00000198392 679 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm43235-201ENSMUST00000200121 297 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm18691-201ENSMUST00000203593 872 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.96□□□□□ -1.46
Col8a1Q00780 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm20074-201ENSMUST00000208144 484 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 AC102369.1-201ENSMUST00000218415 373 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm36933-201ENSMUST00000194945 3071 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 AC124680.1-201ENSMUST00000223923 1585 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm38300-201ENSMUST00000194245 1870 ntBASIC5.96□□□□□ -1.46
Col8a1Q00780 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col8a1Q00780 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col8a1Q00780 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms