Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.36□□□□□ -1.55
Nkx3-1P97436 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.36□□□□□ -1.55
Nkx3-1P97436 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.36□□□□□ -1.55
Nkx3-1P97436 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.36□□□□□ -1.55
Nkx3-1P97436 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm33167-201ENSMUST00000201933 2643 ntBASIC5.36□□□□□ -1.55
Nkx3-1P97436 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm26067-201ENSMUST00000103789 110 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm5401-201ENSMUST00000122444 365 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm6472-201ENSMUST00000178147 651 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm29072-201ENSMUST00000191149 678 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm38131-201ENSMUST00000192449 430 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm37187-201ENSMUST00000193425 341 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm35013-201ENSMUST00000197218 832 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm42619-201ENSMUST00000197564 1136 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm4742-201ENSMUST00000200261 771 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm7663-201ENSMUST00000201151 1240 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm45026-201ENSMUST00000205292 833 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm45750-201ENSMUST00000211966 354 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC5.35□□□□□ -1.55
Nkx3-1P97436 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Nkx3-1P97436 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Zfp850-201ENSMUST00000099111 941 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm42940-201ENSMUST00000200361 2362 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Nkx3-1P97436 Gm37216-201ENSMUST00000193817 3478 ntBASIC5.35□□□□□ -1.55
Nkx3-1P97436 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx3-1P97436 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm37100-201ENSMUST00000193344 1353 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm15078-201ENSMUST00000118371 782 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm13998-201ENSMUST00000120952 335 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm8761-201ENSMUST00000121507 955 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm25459-201ENSMUST00000157953 114 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm38181-201ENSMUST00000181357 720 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm27006-201ENSMUST00000182218 943 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm31211-201ENSMUST00000199170 253 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm19182-201ENSMUST00000207139 577 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm44984-201ENSMUST00000207802 394 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 AC167222.2-201ENSMUST00000220014 295 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 568.3 ms