Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SgcaP82350 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SgcaP82350 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SgcaP82350 Gm10145-201ENSMUST00000077776 462 ntBASIC5.15□□□□□ -1.59
SgcaP82350 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SgcaP82350 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SgcaP82350 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SgcaP82350 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SgcaP82350 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.59
SgcaP82350 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SgcaP82350 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SgcaP82350 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
SgcaP82350 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SgcaP82350 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.15□□□□□ -1.59
SgcaP82350 Gm29761-201ENSMUST00000215964 1939 ntBASIC5.15□□□□□ -1.59
SgcaP82350 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SgcaP82350 Gm9839-201ENSMUST00000195252 1437 ntBASIC5.14□□□□□ -1.59
SgcaP82350 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SgcaP82350 AC130831.1-201ENSMUST00000224546 1474 ntBASIC5.14□□□□□ -1.59
SgcaP82350 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SgcaP82350 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
SgcaP82350 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SgcaP82350 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SgcaP82350 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SgcaP82350 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SgcaP82350 Gm25564-201ENSMUST00000104604 132 ntBASIC5.14□□□□□ -1.59
SgcaP82350 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SgcaP82350 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SgcaP82350 Gm14614-201ENSMUST00000119873 384 ntBASIC5.14□□□□□ -1.59
SgcaP82350 Gm14716-201ENSMUST00000120138 718 ntBASIC5.14□□□□□ -1.59
SgcaP82350 Gm7700-201ENSMUST00000120273 970 ntBASIC5.14□□□□□ -1.59
SgcaP82350 Gm12104-201ENSMUST00000120359 979 ntBASIC5.14□□□□□ -1.59
SgcaP82350 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC5.14□□□□□ -1.59
SgcaP82350 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC5.14□□□□□ -1.59
SgcaP82350 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SgcaP82350 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
SgcaP82350 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
SgcaP82350 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SgcaP82350 Gm25640-201ENSMUST00000175378 125 ntBASIC5.14□□□□□ -1.59
SgcaP82350 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SgcaP82350 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
SgcaP82350 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC5.14□□□□□ -1.59
SgcaP82350 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC5.14□□□□□ -1.59
SgcaP82350 Gm5711-201ENSMUST00000197896 421 ntBASIC5.14□□□□□ -1.59
SgcaP82350 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC5.14□□□□□ -1.59
SgcaP82350 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC5.14□□□□□ -1.59
SgcaP82350 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC5.14□□□□□ -1.59
SgcaP82350 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC5.14□□□□□ -1.59
SgcaP82350 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC5.14□□□□□ -1.59
SgcaP82350 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.14□□□□□ -1.59
SgcaP82350 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.14□□□□□ -1.59
SgcaP82350 AC154646.1-201ENSMUST00000225011 1092 ntBASIC5.14□□□□□ -1.59
SgcaP82350 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SgcaP82350 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SgcaP82350 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.14□□□□□ -1.59
SgcaP82350 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SgcaP82350 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SgcaP82350 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.14□□□□□ -1.59
SgcaP82350 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SgcaP82350 Gm45793-201ENSMUST00000207900 1342 ntBASIC5.14□□□□□ -1.59
SgcaP82350 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SgcaP82350 Gm7690-201ENSMUST00000190885 1399 ntBASIC5.14□□□□□ -1.59
SgcaP82350 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC5.14□□□□□ -1.59
SgcaP82350 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SgcaP82350 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SgcaP82350 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SgcaP82350 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SgcaP82350 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.13□□□□□ -1.59
SgcaP82350 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SgcaP82350 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SgcaP82350 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SgcaP82350 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SgcaP82350 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SgcaP82350 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.13□□□□□ -1.59
SgcaP82350 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
SgcaP82350 Gm4234-201ENSMUST00000119747 714 ntBASIC5.13□□□□□ -1.59
SgcaP82350 Gm13924-201ENSMUST00000119899 486 ntBASIC5.13□□□□□ -1.59
SgcaP82350 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SgcaP82350 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SgcaP82350 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SgcaP82350 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SgcaP82350 Mir5100-201ENSMUST00000174993 64 ntBASIC5.13□□□□□ -1.59
SgcaP82350 Gm23632-201ENSMUST00000175289 125 ntBASIC5.13□□□□□ -1.59
SgcaP82350 Gm23018-201ENSMUST00000177928 109 ntBASIC5.13□□□□□ -1.59
SgcaP82350 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SgcaP82350 Gm18875-201ENSMUST00000188563 882 ntBASIC5.13□□□□□ -1.59
SgcaP82350 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC5.13□□□□□ -1.59
SgcaP82350 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.13□□□□□ -1.59
SgcaP82350 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SgcaP82350 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SgcaP82350 Gm32158-201ENSMUST00000200135 404 ntBASIC5.13□□□□□ -1.59
SgcaP82350 AC099934.1-201ENSMUST00000200493 79 ntBASIC5.13□□□□□ -1.59
SgcaP82350 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC5.13□□□□□ -1.59
SgcaP82350 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC5.13□□□□□ -1.59
SgcaP82350 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SgcaP82350 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC5.13□□□□□ -1.59
SgcaP82350 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.13□□□□□ -1.59
SgcaP82350 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SgcaP82350 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC5.13□□□□□ -1.59
SgcaP82350 Gm4042-201ENSMUST00000216946 637 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms