Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm18729-201ENSMUST00000217230 621 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm7045-201ENSMUST00000221466 605 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 AC154510.1-201ENSMUST00000223925 737 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Sf3b6P59708 AC130673.1-201ENSMUST00000227992 435 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.4
Sf3b6P59708 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.27□□□□□ -1.4
Sf3b6P59708 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm43369-201ENSMUST00000196373 1552 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sf3b6P59708 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sf3b6P59708 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.27□□□□□ -1.41
Sf3b6P59708 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sf3b6P59708 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm6746-201ENSMUST00000108774 483 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm11858-201ENSMUST00000117935 838 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm13858-201ENSMUST00000118862 671 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm15007-201ENSMUST00000119982 710 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm9085-201ENSMUST00000119994 1072 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm12770-201ENSMUST00000121734 462 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm15141-201ENSMUST00000121860 729 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sf3b6P59708 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm9141-201ENSMUST00000159355 1007 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Sf3b6P59708 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm18128-201ENSMUST00000172625 511 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC6.27□□□□□ -1.41
Sf3b6P59708 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm22252-201ENSMUST00000179316 79 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm18709-201ENSMUST00000180564 489 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm27964-201ENSMUST00000185195 62 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm6610-201ENSMUST00000186324 358 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm28117-201ENSMUST00000188472 371 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm37392-201ENSMUST00000192098 516 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm37979-201ENSMUST00000193065 712 ntBASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC6.27□□□□□ -1.41
Sf3b6P59708 Gm22149-202ENSMUST00000196259 137 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms