Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm4322-201ENSMUST00000191094 336 ntBASIC6.66□□□□□ -1.34
Tpm1P58771 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Tpm1P58771 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.66□□□□□ -1.34
Tpm1P58771 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.66□□□□□ -1.34
Tpm1P58771 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Tpm1P58771 Gm44582-201ENSMUST00000209125 445 ntBASIC6.66□□□□□ -1.34
Tpm1P58771 Gm18255-201ENSMUST00000211316 765 ntBASIC6.66□□□□□ -1.34
Tpm1P58771 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.66□□□□□ -1.34
Tpm1P58771 Gm45473-201ENSMUST00000211452 616 ntBASIC6.66□□□□□ -1.34
Tpm1P58771 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Tpm1P58771 Gm2398-201ENSMUST00000218347 883 ntBASIC6.66□□□□□ -1.34
Tpm1P58771 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Tpm1P58771 Gm8607-201ENSMUST00000221864 431 ntBASIC6.66□□□□□ -1.34
Tpm1P58771 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.66□□□□□ -1.34
Tpm1P58771 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Tpm1P58771 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tpm1P58771 Gm24411-201ENSMUST00000083428 131 ntBASIC6.66□□□□□ -1.34
Tpm1P58771 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Tpm1P58771 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tpm1P58771 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tpm1P58771 Gm9575-201ENSMUST00000122140 1339 ntBASIC6.66□□□□□ -1.34
Tpm1P58771 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tpm1P58771 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Tpm1P58771 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
Tpm1P58771 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tpm1P58771 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Tpm1P58771 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tpm1P58771 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tpm1P58771 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.66□□□□□ -1.34
Tpm1P58771 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.66□□□□□ -1.34
Tpm1P58771 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tpm1P58771 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.66□□□□□ -1.34
Tpm1P58771 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Tpm1P58771 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.66□□□□□ -1.34
Tpm1P58771 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Tpm1P58771 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Tpm1P58771 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.65□□□□□ -1.34
Tpm1P58771 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.65□□□□□ -1.34
Tpm1P58771 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
Tpm1P58771 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Tpm1P58771 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Tpm1P58771 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Tpm1P58771 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Tpm1P58771 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.65□□□□□ -1.34
Tpm1P58771 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Tpm1P58771 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Tpm1P58771 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Tpm1P58771 Gm7212-201ENSMUST00000120817 348 ntBASIC6.65□□□□□ -1.34
Tpm1P58771 Gm7599-201ENSMUST00000121453 796 ntBASIC6.65□□□□□ -1.34
Tpm1P58771 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.65□□□□□ -1.34
Tpm1P58771 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Tpm1P58771 Mir1945-201ENSMUST00000157919 78 ntBASIC6.65□□□□□ -1.34
Tpm1P58771 Gm24363-201ENSMUST00000158440 311 ntBASIC6.65□□□□□ -1.34
Tpm1P58771 Gm7418-201ENSMUST00000162120 801 ntBASIC6.65□□□□□ -1.34
Tpm1P58771 Gm7289-201ENSMUST00000168993 734 ntBASIC6.65□□□□□ -1.34
Tpm1P58771 Gm3344-201ENSMUST00000169610 603 ntBASIC6.65□□□□□ -1.34
Tpm1P58771 Mir7115-201ENSMUST00000184275 64 ntBASIC6.65□□□□□ -1.34
Tpm1P58771 Gm4860-201ENSMUST00000200368 454 ntBASIC6.65□□□□□ -1.34
Tpm1P58771 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.65□□□□□ -1.34
Tpm1P58771 Gm5306-201ENSMUST00000203325 757 ntBASIC6.65□□□□□ -1.34
Tpm1P58771 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.65□□□□□ -1.34
Tpm1P58771 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.65□□□□□ -1.34
Tpm1P58771 Gm7769-201ENSMUST00000212900 933 ntBASIC6.65□□□□□ -1.34
Tpm1P58771 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.65□□□□□ -1.34
Tpm1P58771 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.65□□□□□ -1.34
Tpm1P58771 Gm10205-201ENSMUST00000087431 234 ntBASIC6.65□□□□□ -1.34
Tpm1P58771 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Tpm1P58771 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Tpm1P58771 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Tpm1P58771 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.65□□□□□ -1.35
Tpm1P58771 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC6.65□□□□□ -1.35
Tpm1P58771 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC6.65□□□□□ -1.35
Tpm1P58771 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.65□□□□□ -1.35
Tpm1P58771 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.65□□□□□ -1.35
Tpm1P58771 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Tpm1P58771 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.65□□□□□ -1.35
Tpm1P58771 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.65□□□□□ -1.35
Tpm1P58771 Gm37060-201ENSMUST00000194997 2397 ntBASIC6.65□□□□□ -1.35
Tpm1P58771 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.35
Tpm1P58771 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.65□□□□□ -1.35
Tpm1P58771 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Tpm1P58771 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.64□□□□□ -1.35
Tpm1P58771 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Tpm1P58771 Gm37456-201ENSMUST00000193176 5837 ntBASIC6.64□□□□□ -1.35
Tpm1P58771 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Tpm1P58771 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Tpm1P58771 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Tpm1P58771 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Tpm1P58771 Mir711-201ENSMUST00000102188 82 ntBASIC6.64□□□□□ -1.35
Tpm1P58771 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Tpm1P58771 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.64□□□□□ -1.35
Tpm1P58771 Gm8692-201ENSMUST00000118102 438 ntBASIC6.64□□□□□ -1.35
Tpm1P58771 Gm12442-201ENSMUST00000118372 338 ntBASIC6.64□□□□□ -1.35
Tpm1P58771 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.64□□□□□ -1.35
Tpm1P58771 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.64□□□□□ -1.35
Tpm1P58771 Gm15153-201ENSMUST00000119867 274 ntBASIC6.64□□□□□ -1.35
Tpm1P58771 Gm15750-201ENSMUST00000120970 616 ntBASIC6.64□□□□□ -1.35
Tpm1P58771 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.64□□□□□ -1.35
Tpm1P58771 Gm25617-201ENSMUST00000179548 133 ntBASIC6.64□□□□□ -1.35
Tpm1P58771 Gm27601-201ENSMUST00000184794 127 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms