Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Nub1P54729 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Nub1P54729 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Nub1P54729 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Nub1P54729 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Nub1P54729 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
Nub1P54729 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Nub1P54729 Gm37140-201ENSMUST00000192914 1684 ntBASIC7.54□□□□□ -1.2
Nub1P54729 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Nub1P54729 AC159624.1-201ENSMUST00000217762 1344 ntBASIC7.53□□□□□ -1.2
Nub1P54729 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Nub1P54729 Gm20679-201ENSMUST00000177285 1402 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 AC158981.2-201ENSMUST00000227565 1537 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Nub1P54729 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Nub1P54729 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Nub1P54729 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Nub1P54729 Gm25631-201ENSMUST00000104390 130 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Nub1P54729 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Gm15000-201ENSMUST00000118275 1243 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Gm12477-201ENSMUST00000121221 571 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC7.53□□□□□ -1.2
Nub1P54729 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC7.53□□□□□ -1.2
Nub1P54729 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC7.53□□□□□ -1.2
Nub1P54729 Gm23740-201ENSMUST00000157385 100 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Gm24286-201ENSMUST00000157632 128 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Gm16589-201ENSMUST00000159522 918 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
Nub1P54729 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Nub1P54729 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC7.53□□□□□ -1.2
Nub1P54729 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Nub1P54729 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Nub1P54729 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC7.53□□□□□ -1.2
Nub1P54729 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.53□□□□□ -1.2
Nub1P54729 Gm37152-201ENSMUST00000193369 1175 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Gm7512-201ENSMUST00000195217 1170 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Gm43308-201ENSMUST00000197236 373 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC7.53□□□□□ -1.2
Nub1P54729 Gm42804-201ENSMUST00000199701 178 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Gm44432-201ENSMUST00000203342 938 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC7.53□□□□□ -1.2
Nub1P54729 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.53□□□□□ -1.2
Nub1P54729 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Gm3912-203ENSMUST00000211024 367 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC7.53□□□□□ -1.2
Nub1P54729 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC7.53□□□□□ -1.2
Nub1P54729 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Anxa13-202ENSMUST00000227274 1201 ntBASIC7.53□□□□□ -1.2
Nub1P54729 AC121114.1-201ENSMUST00000228522 570 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Nub1P54729 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Nub1P54729 Vaultrc5-201ENSMUST00000083211 143 ntBASIC7.53□□□□□ -1.2
Nub1P54729 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Nub1P54729 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC7.53□□□□□ -1.2
Nub1P54729 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC7.53□□□□□ -1.2
Nub1P54729 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
Nub1P54729 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC7.53□□□□□ -1.2
Nub1P54729 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Nub1P54729 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Nub1P54729 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Nub1P54729 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.53□□□□□ -1.2
Nub1P54729 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
Nub1P54729 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Nub1P54729 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC7.52□□□□□ -1.2
Nub1P54729 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Nub1P54729 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Nub1P54729 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
Nub1P54729 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Nub1P54729 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Nub1P54729 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Nub1P54729 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Nub1P54729 Gm43775-201ENSMUST00000201019 3395 ntBASIC7.52□□□□□ -1.21
Nub1P54729 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms