Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Sox1P53783 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.22□□□□□ -1.25
Sox1P53783 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Sox1P53783 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Gm25647-201ENSMUST00000101832 78 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm25823-201ENSMUST00000101995 78 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Sox1P53783 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Gm12844-201ENSMUST00000119463 582 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm2318-201ENSMUST00000119623 639 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Gm15192-201ENSMUST00000121005 293 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm12222-201ENSMUST00000121368 260 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm24592-201ENSMUST00000122505 106 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC7.22□□□□□ -1.25
Sox1P53783 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm23250-201ENSMUST00000157444 267 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm24363-201ENSMUST00000158440 311 ntBASIC7.22□□□□□ -1.25
Sox1P53783 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC7.22□□□□□ -1.25
Sox1P53783 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm23806-201ENSMUST00000175157 109 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Mir3085-201ENSMUST00000175493 89 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm20702-201ENSMUST00000176181 460 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm7438-201ENSMUST00000177664 639 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm24220-201ENSMUST00000177753 79 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm25988-201ENSMUST00000177759 79 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm23471-201ENSMUST00000177886 79 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm7408-201ENSMUST00000178014 639 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm7386-201ENSMUST00000178020 639 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm3657-201ENSMUST00000178170 639 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm7415-201ENSMUST00000178205 639 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm26488-201ENSMUST00000178225 79 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm7398-201ENSMUST00000178589 639 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm7391-201ENSMUST00000178680 639 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm23449-201ENSMUST00000179208 79 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm7375-201ENSMUST00000179232 639 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm3681-201ENSMUST00000179940 639 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm25221-201ENSMUST00000180051 79 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC7.22□□□□□ -1.25
Sox1P53783 Gm27236-201ENSMUST00000184147 442 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm18727-201ENSMUST00000185981 553 ntBASIC7.22□□□□□ -1.25
Sox1P53783 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Sox1P53783 Gm37135-201ENSMUST00000192652 534 ntBASIC7.22□□□□□ -1.25
Sox1P53783 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Sox1P53783 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.22□□□□□ -1.25
Sox1P53783 Gm44300-201ENSMUST00000196792 121 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC7.22□□□□□ -1.25
Sox1P53783 Gm19104-201ENSMUST00000198392 679 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Igkv12-66-201ENSMUST00000199305 348 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC7.22□□□□□ -1.25
Sox1P53783 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.22□□□□□ -1.25
Sox1P53783 Gm18467-201ENSMUST00000208805 434 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC7.22□□□□□ -1.25
Sox1P53783 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC7.22□□□□□ -1.25
Sox1P53783 AC154851.1-201ENSMUST00000221591 655 ntBASIC7.22□□□□□ -1.25
Sox1P53783 AC140930.1-201ENSMUST00000221889 389 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm7252-201ENSMUST00000223284 456 ntBASIC7.22□□□□□ -1.25
Sox1P53783 AC154573.2-201ENSMUST00000224174 378 ntBASIC7.22□□□□□ -1.25
Sox1P53783 CT030254.1-201ENSMUST00000225450 1078 ntBASIC7.22□□□□□ -1.25
Sox1P53783 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.22□□□□□ -1.25
Sox1P53783 AC124103.1-201ENSMUST00000227564 1027 ntBASIC7.22□□□□□ -1.25
Sox1P53783 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Sox1P53783 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Snora44-201ENSMUST00000082670 129 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Sox1P53783 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Sox1P53783 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC7.22□□□□□ -1.25
Sox1P53783 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Sox1P53783 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Sox1P53783 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC7.22□□□□□ -1.25
Sox1P53783 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Sox1P53783 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Sox1P53783 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Dgkh-206ENSMUST00000228362 3308 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 AC168056.3-201ENSMUST00000225395 2540 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms