Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm37380-201ENSMUST00000193752 397 ntBASIC6.23□□□□□ -1.41
Hoxc11P31313 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.23□□□□□ -1.41
Hoxc11P31313 Gm44431-201ENSMUST00000203500 413 ntBASIC6.23□□□□□ -1.41
Hoxc11P31313 Gm17918-201ENSMUST00000205315 574 ntBASIC6.23□□□□□ -1.41
Hoxc11P31313 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxc11P31313 Gm44984-201ENSMUST00000207802 394 ntBASIC6.23□□□□□ -1.41
Hoxc11P31313 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxc11P31313 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Hoxc11P31313 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC6.23□□□□□ -1.41
Hoxc11P31313 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC6.23□□□□□ -1.41
Hoxc11P31313 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxc11P31313 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.23□□□□□ -1.41
Hoxc11P31313 Gm9535-201ENSMUST00000218499 768 ntBASIC6.23□□□□□ -1.41
Hoxc11P31313 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.23□□□□□ -1.41
Hoxc11P31313 AC134254.4-201ENSMUST00000223086 370 ntBASIC6.23□□□□□ -1.41
Hoxc11P31313 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Hoxc11P31313 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxc11P31313 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxc11P31313 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.23□□□□□ -1.41
Hoxc11P31313 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Hoxc11P31313 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxc11P31313 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxc11P31313 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxc11P31313 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxc11P31313 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.23□□□□□ -1.41
Hoxc11P31313 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxc11P31313 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxc11P31313 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Hoxc11P31313 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Hoxc11P31313 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxc11P31313 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxc11P31313 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Hoxc11P31313 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxc11P31313 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm45322-201ENSMUST00000211642 1361 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxc11P31313 Mir680-1-201ENSMUST00000102257 109 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm8534-201ENSMUST00000118553 766 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm13222-201ENSMUST00000119638 138 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm12833-201ENSMUST00000136112 477 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm25669-201ENSMUST00000157699 112 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.22□□□□□ -1.41
Hoxc11P31313 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm27602-201ENSMUST00000183861 111 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm37809-201ENSMUST00000195050 931 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm6057-201ENSMUST00000195927 314 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Trdv3-201ENSMUST00000198551 309 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.22□□□□□ -1.41
Hoxc11P31313 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.22□□□□□ -1.41
Hoxc11P31313 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm44559-201ENSMUST00000207177 1012 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm45405-201ENSMUST00000211544 609 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Hoxc11P31313 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 AC154828.2-201ENSMUST00000220908 1070 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm6195-201ENSMUST00000063059 357 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm5321-201ENSMUST00000072050 447 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Mir3068-201ENSMUST00000083004 136 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm24405-201ENSMUST00000083033 167 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Hoxc11P31313 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxc11P31313 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxc11P31313 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Hoxc11P31313 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxc11P31313 Gm37124-201ENSMUST00000192140 1992 ntBASIC6.22□□□□□ -1.41
Hoxc11P31313 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms