Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm27156-201ENSMUST00000184589 754 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm27998-201ENSMUST00000184902 361 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm8367-201ENSMUST00000186145 887 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm6472-202ENSMUST00000187973 582 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm29111-201ENSMUST00000188823 696 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm29201-201ENSMUST00000189120 431 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm29175-201ENSMUST00000189500 402 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm28584-201ENSMUST00000191489 696 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm38138-201ENSMUST00000193274 696 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC4.89□□□□□ -1.63
Sdc1P18828 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm37758-201ENSMUST00000194275 629 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm37991-201ENSMUST00000194297 696 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm42443-201ENSMUST00000198084 1155 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm6649-201ENSMUST00000199743 1165 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm18593-201ENSMUST00000200754 1139 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm44422-201ENSMUST00000204142 1025 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm44539-201ENSMUST00000206010 238 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm44931-201ENSMUST00000206056 545 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm45100-201ENSMUST00000209153 391 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 AL929555.1-201ENSMUST00000215283 509 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm9289-201ENSMUST00000221269 606 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 AC133203.2-201ENSMUST00000226709 464 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Sdc1P18828 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm6104-201ENSMUST00000078030 603 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Sdc1P18828 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm4973-201ENSMUST00000206925 1334 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sdc1P18828 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC4.89□□□□□ -1.63
Sdc1P18828 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sdc1P18828 AC117608.2-201ENSMUST00000224124 1363 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sdc1P18828 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
Sdc1P18828 AC130827.1-201ENSMUST00000220476 3850 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Sdc1P18828 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Sdc1P18828 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Sdc1P18828 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Sdc1P18828 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 AC134577.3-201ENSMUST00000226490 3000 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm37049-201ENSMUST00000194356 1983 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Mir674-201ENSMUST00000102421 100 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Gm24373-201ENSMUST00000104393 132 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC4.88□□□□□ -1.63
Sdc1P18828 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Gm13818-201ENSMUST00000119441 511 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm16016-201ENSMUST00000120831 550 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Gm12451-201ENSMUST00000121636 633 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC4.88□□□□□ -1.63
Sdc1P18828 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm25487-201ENSMUST00000158725 125 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm20453-201ENSMUST00000173968 226 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Gm25082-201ENSMUST00000177296 255 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm6223-201ENSMUST00000178436 871 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Gm27014-201ENSMUST00000182658 937 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Mir6241-201ENSMUST00000184225 103 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm18447-201ENSMUST00000187501 307 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm36965-201ENSMUST00000193797 394 ntBASIC4.88□□□□□ -1.63
Sdc1P18828 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sdc1P18828 Gm26413-202ENSMUST00000198972 127 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms