Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Cblb-205ENSMUST00000227756 3378 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm43679-201ENSMUST00000197051 3677 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Hibch-202ENSMUST00000159352 1704 ntTSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Fhl1-205ENSMUST00000114773 2298 ntTSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Muc2-201ENSMUST00000026590 2032 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm23706-201ENSMUST00000104369 82 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm13379-201ENSMUST00000118053 621 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm11907-201ENSMUST00000118918 1007 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm11262-201ENSMUST00000119326 833 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm13603-201ENSMUST00000119404 83 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm12607-201ENSMUST00000120724 493 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm11759-201ENSMUST00000121742 464 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Magea9-ps-201ENSMUST00000140655 732 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Scarna17-201ENSMUST00000158064 79 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm7162-201ENSMUST00000161205 1024 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm11107-201ENSMUST00000165414 505 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Magea9-ps-202ENSMUST00000167328 899 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm20485-201ENSMUST00000174452 394 ntTSL 2 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm23568-201ENSMUST00000177960 92 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm24829-201ENSMUST00000179245 92 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm27428-201ENSMUST00000184289 110 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.17□□□□□ -1.42
Hoxd3P09027 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm43144-201ENSMUST00000198256 485 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm42558-201ENSMUST00000200982 265 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm43039-201ENSMUST00000202883 963 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm44794-201ENSMUST00000206550 411 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm4501-201ENSMUST00000207330 551 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm4558-201ENSMUST00000207886 521 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm4528-201ENSMUST00000207905 551 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm45789-201ENSMUST00000213038 364 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 CT030170.6-202ENSMUST00000223186 544 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 AC152394.1-201ENSMUST00000227360 1086 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm25259-201ENSMUST00000083048 193 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Mir129-2-201ENSMUST00000083577 90 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Mir24-2-201ENSMUST00000083607 107 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm16391-201ENSMUST00000086601 447 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm42841-201ENSMUST00000199806 1932 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd3P09027 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms