Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm24417-201ENSMUST00000178123 79 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm24653-201ENSMUST00000178541 79 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm25934-201ENSMUST00000178642 79 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm8669-201ENSMUST00000183839 945 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm7634-201ENSMUST00000185778 553 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm18349-201ENSMUST00000187440 904 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm21728-201ENSMUST00000188442 695 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm21889-201ENSMUST00000188487 695 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm20932-201ENSMUST00000189115 694 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm21920-201ENSMUST00000190042 695 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm19224-201ENSMUST00000190477 793 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm38261-201ENSMUST00000192608 316 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm43812-202ENSMUST00000202701 581 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm44432-201ENSMUST00000203342 938 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm18855-201ENSMUST00000206689 570 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 AC126275.1-201ENSMUST00000224881 446 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 AC161252.2-201ENSMUST00000224978 374 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 AC121960.3-201ENSMUST00000227077 623 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 CT025630.2-201ENSMUST00000228293 487 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm20900-201ENSMUST00000078729 472 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm25852-201ENSMUST00000082790 130 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 AC159624.1-201ENSMUST00000217762 1344 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm25422-201ENSMUST00000104219 129 ntBASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm25848-201ENSMUST00000116790 144 ntBASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm15484-201ENSMUST00000118871 828 ntBASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm13130-201ENSMUST00000119195 1166 ntBASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm13221-201ENSMUST00000121712 430 ntBASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm22793-201ENSMUST00000157227 330 ntBASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm26393-201ENSMUST00000157625 129 ntBASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm7707-201ENSMUST00000165950 1156 ntBASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm18560-201ENSMUST00000173463 1123 ntBASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm5473-201ENSMUST00000179326 642 ntBASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC6.17□□□□□ -1.42
Pcdh1F7BJK1 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 189.6 ms