Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
Col4a6B1AVK5 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm44777-201ENSMUST00000205941 4052 ntBASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm14349-201ENSMUST00000137155 902 ntBASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm27985-201ENSMUST00000185112 378 ntBASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm28061-201ENSMUST00000189085 807 ntBASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm9332-201ENSMUST00000198431 730 ntBASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.27□□□□□ -1.41
Col4a6B1AVK5 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm6049-201ENSMUST00000222369 458 ntBASIC6.27□□□□□ -1.41
Col4a6B1AVK5 AC164315.1-201ENSMUST00000226452 708 ntBASIC6.27□□□□□ -1.41
Col4a6B1AVK5 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm43099-201ENSMUST00000198943 5241 ntBASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.27□□□□□ -1.41
Col4a6B1AVK5 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.27□□□□□ -1.41
Col4a6B1AVK5 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Mir1188-201ENSMUST00000116756 120 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Mir1963-201ENSMUST00000158594 59 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm43516-201ENSMUST00000196891 322 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm43743-202ENSMUST00000198353 491 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm6520-201ENSMUST00000200636 410 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm17165-201ENSMUST00000096155 493 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 AC120153.1-201ENSMUST00000226502 1311 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.26□□□□□ -1.41
Col4a6B1AVK5 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.26□□□□□ -1.41
Col4a6B1AVK5 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms