Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gm43233-201ENSMUST00000200491 616 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gm43762-201ENSMUST00000201521 295 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gm5027-201ENSMUST00000206700 375 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gm6070-201ENSMUST00000207275 419 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gm3785-201ENSMUST00000221000 202 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gm9292-201ENSMUST00000222008 710 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm25795-201ENSMUST00000104421 132 ntBASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm12152-201ENSMUST00000122465 684 ntBASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Mir7685-201ENSMUST00000183555 62 ntBASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm28586-201ENSMUST00000189857 456 ntBASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm29551-201ENSMUST00000190913 698 ntBASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm7570-201ENSMUST00000215246 698 ntBASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm6562-201ENSMUST00000221903 464 ntBASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm10095-201ENSMUST00000222765 483 ntBASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.17□□□□□ -1.42
Cldn3Q9Z0G9 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Gm37262-201ENSMUST00000192816 1818 ntBASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Cldn3Q9Z0G9 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms