Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm18628-201ENSMUST00000220584 475 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 AC116596.2-203ENSMUST00000227345 731 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm26442-201ENSMUST00000082588 153 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.48
Trim3Q9R1R2 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Trim3Q9R1R2 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm24272-201ENSMUST00000102329 98 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm12040-201ENSMUST00000118357 537 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm12813-201ENSMUST00000119615 902 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm8430-201ENSMUST00000119780 471 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm16511-201ENSMUST00000120019 564 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm6620-201ENSMUST00000120113 715 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm11341-201ENSMUST00000122316 447 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm26162-201ENSMUST00000157793 132 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm27853-201ENSMUST00000184176 250 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm37135-201ENSMUST00000192652 534 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm43762-201ENSMUST00000201521 295 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm18805-201ENSMUST00000206872 655 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm6070-201ENSMUST00000207275 419 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gm9293-201ENSMUST00000223096 306 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Trim3Q9R1R2 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm26144-201ENSMUST00000104475 132 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm25346-201ENSMUST00000104509 128 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm14356-201ENSMUST00000118322 869 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm8855-201ENSMUST00000118888 878 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Gm14018-201ENSMUST00000119042 455 ntBASIC5.82□□□□□ -1.48
Trim3Q9R1R2 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms