Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm44221-201ENSMUST00000203552 388 ntBASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Gm45228-201ENSMUST00000206585 352 ntBASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Gm9354-201ENSMUST00000209075 468 ntBASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 AC165349.2-201ENSMUST00000219097 426 ntBASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Gm18243-201ENSMUST00000220756 887 ntBASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 AC154760.1-201ENSMUST00000227218 673 ntBASIC6.95□□□□□ -1.3
Trim39Q9ESN2 AC154532.2-201ENSMUST00000228947 598 ntBASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 AC165260.6-202ENSMUST00000224959 1958 ntBASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim39Q9ESN2 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 AC102431.1-201ENSMUST00000223773 1449 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm13929-201ENSMUST00000117553 1125 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm4918-201ENSMUST00000119420 1084 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm5383-201ENSMUST00000121177 617 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm15152-201ENSMUST00000121540 394 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm23885-201ENSMUST00000122682 294 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm23822-201ENSMUST00000158739 128 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm6726-201ENSMUST00000172786 681 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 n-R5s115-201ENSMUST00000179019 119 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Mir6922-201ENSMUST00000185099 66 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm3454-201ENSMUST00000185571 412 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm28596-201ENSMUST00000185870 696 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm29126-201ENSMUST00000188686 151 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm19694-201ENSMUST00000192364 505 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm32295-201ENSMUST00000192558 696 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm31260-201ENSMUST00000193478 696 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm23011-202ENSMUST00000197855 275 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm43576-201ENSMUST00000197937 871 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm8999-201ENSMUST00000204951 969 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm16475-202ENSMUST00000209033 528 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm45497-201ENSMUST00000211701 740 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm4977-201ENSMUST00000215709 1262 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Rpl32l-201ENSMUST00000216127 399 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm4898-201ENSMUST00000218519 832 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 AC161374.2-201ENSMUST00000223662 596 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 AC239878.2-201ENSMUST00000224048 464 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm4953-201ENSMUST00000077309 483 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 n-R5s193-201ENSMUST00000082864 109 ntBASIC6.94□□□□□ -1.3
Trim39Q9ESN2 Gm23242-201ENSMUST00000083055 107 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms