Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm8250-201ENSMUST00000117398 774 ntBASIC5.95□□□□□ -1.46
Lima1Q9ERG0 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm25989-201ENSMUST00000158761 133 ntBASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm23343-201ENSMUST00000158964 143 ntBASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm16298-201ENSMUST00000161107 420 ntBASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm22548-201ENSMUST00000174899 78 ntBASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm4904-201ENSMUST00000178243 1195 ntBASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm4845-201ENSMUST00000179202 562 ntBASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Mir7b-201ENSMUST00000083557 111 ntBASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm23768-201ENSMUST00000104440 131 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm12565-201ENSMUST00000119004 649 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm11445-201ENSMUST00000119101 532 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm13626-201ENSMUST00000119435 402 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Mir1945-201ENSMUST00000157919 78 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm7626-201ENSMUST00000195801 353 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 AC163621.1-201ENSMUST00000220695 379 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 AC154640.3-201ENSMUST00000227492 846 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Lima1Q9ERG0 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms