Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm7108-201ENSMUST00000118038 3407 ntBASIC8.07□□□□□ -1.12
U2af1Q9D883 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
U2af1Q9D883 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
U2af1Q9D883 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
U2af1Q9D883 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC8.07□□□□□ -1.12
U2af1Q9D883 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC8.07□□□□□ -1.12
U2af1Q9D883 Gm4660-201ENSMUST00000131499 403 ntBASIC8.07□□□□□ -1.12
U2af1Q9D883 Gm22730-201ENSMUST00000158085 171 ntBASIC8.07□□□□□ -1.12
U2af1Q9D883 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
U2af1Q9D883 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
U2af1Q9D883 Mir6361-201ENSMUST00000185079 101 ntBASIC8.07□□□□□ -1.12
U2af1Q9D883 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC8.07□□□□□ -1.12
U2af1Q9D883 Gm19080-201ENSMUST00000196082 550 ntBASIC8.07□□□□□ -1.12
U2af1Q9D883 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC8.07□□□□□ -1.12
U2af1Q9D883 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
U2af1Q9D883 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC8.07□□□□□ -1.12
U2af1Q9D883 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC8.07□□□□□ -1.12
U2af1Q9D883 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC8.07□□□□□ -1.12
U2af1Q9D883 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC8.07□□□□□ -1.12
U2af1Q9D883 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC8.07□□□□□ -1.12
U2af1Q9D883 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC8.07□□□□□ -1.12
U2af1Q9D883 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC8.07□□□□□ -1.12
U2af1Q9D883 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC8.07□□□□□ -1.12
U2af1Q9D883 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
U2af1Q9D883 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
U2af1Q9D883 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
U2af1Q9D883 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
U2af1Q9D883 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
U2af1Q9D883 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
U2af1Q9D883 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
U2af1Q9D883 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
U2af1Q9D883 Gm42894-201ENSMUST00000200788 3390 ntBASIC8.07□□□□□ -1.12
U2af1Q9D883 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
U2af1Q9D883 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
U2af1Q9D883 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
U2af1Q9D883 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
U2af1Q9D883 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
U2af1Q9D883 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
U2af1Q9D883 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC8.06□□□□□ -1.12
U2af1Q9D883 Dennd6a-204ENSMUST00000224248 2775 ntBASIC8.06□□□□□ -1.12
U2af1Q9D883 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
U2af1Q9D883 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
U2af1Q9D883 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
U2af1Q9D883 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm44102-201ENSMUST00000204031 1666 ntBASIC8.06□□□□□ -1.12
U2af1Q9D883 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm11821-201ENSMUST00000117335 979 ntBASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm13811-201ENSMUST00000117800 256 ntBASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm14712-201ENSMUST00000120195 772 ntBASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm25013-201ENSMUST00000158402 128 ntBASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm28885-201ENSMUST00000185615 563 ntBASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm8367-201ENSMUST00000186145 887 ntBASIC8.06□□□□□ -1.12
U2af1Q9D883 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm35013-201ENSMUST00000197218 832 ntBASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm44239-201ENSMUST00000204228 271 ntBASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm44091-201ENSMUST00000205212 649 ntBASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
U2af1Q9D883 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm7802-201ENSMUST00000216464 262 ntBASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC8.06□□□□□ -1.12
U2af1Q9D883 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC8.06□□□□□ -1.12
U2af1Q9D883 AC211878.5-201ENSMUST00000221697 409 ntBASIC8.06□□□□□ -1.12
U2af1Q9D883 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
U2af1Q9D883 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC8.06□□□□□ -1.12
U2af1Q9D883 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC8.06□□□□□ -1.12
U2af1Q9D883 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC8.06□□□□□ -1.12
U2af1Q9D883 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
U2af1Q9D883 Gm14895-201ENSMUST00000121858 1361 ntBASIC8.06□□□□□ -1.12
U2af1Q9D883 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
U2af1Q9D883 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
U2af1Q9D883 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
U2af1Q9D883 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
U2af1Q9D883 AC022775.1-201ENSMUST00000228163 2698 ntBASIC8.06□□□□□ -1.12
U2af1Q9D883 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
U2af1Q9D883 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
U2af1Q9D883 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
U2af1Q9D883 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
U2af1Q9D883 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
U2af1Q9D883 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
U2af1Q9D883 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
U2af1Q9D883 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
U2af1Q9D883 Gm25917-201ENSMUST00000104267 130 ntBASIC8.05□□□□□ -1.12
U2af1Q9D883 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
U2af1Q9D883 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC8.05□□□□□ -1.12
U2af1Q9D883 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
U2af1Q9D883 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
U2af1Q9D883 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC8.05□□□□□ -1.12
U2af1Q9D883 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
U2af1Q9D883 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
U2af1Q9D883 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
U2af1Q9D883 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC8.05□□□□□ -1.12
U2af1Q9D883 Gm6631-201ENSMUST00000193699 559 ntBASIC8.05□□□□□ -1.12
U2af1Q9D883 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC8.05□□□□□ -1.12
U2af1Q9D883 Gm31211-201ENSMUST00000199170 253 ntBASIC8.05□□□□□ -1.12
U2af1Q9D883 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
U2af1Q9D883 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms