Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 AU020206-202ENSMUST00000206358 3009 ntBASIC6.9□□□□□ -1.31
Ddx56Q9D0R4 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm25760-201ENSMUST00000103989 132 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm24888-201ENSMUST00000104387 130 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm13739-201ENSMUST00000118020 530 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm13359-201ENSMUST00000119000 695 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm13207-201ENSMUST00000119862 773 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm14900-201ENSMUST00000120304 733 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm11545-201ENSMUST00000146507 375 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm23756-201ENSMUST00000157582 114 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm23071-201ENSMUST00000158242 115 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm18833-201ENSMUST00000173218 862 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm38181-201ENSMUST00000181357 720 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm20926-201ENSMUST00000194457 696 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm44265-201ENSMUST00000203631 465 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm43867-201ENSMUST00000203860 525 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm44972-201ENSMUST00000206419 406 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm44845-201ENSMUST00000208773 335 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm45514-201ENSMUST00000211531 689 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm17917-201ENSMUST00000218561 953 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm26203-201ENSMUST00000082911 114 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm23102-201ENSMUST00000083724 116 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx56Q9D0R4 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm23692-201ENSMUST00000101881 160 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm22543-201ENSMUST00000104347 94 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm25344-201ENSMUST00000104503 132 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm14554-201ENSMUST00000119548 661 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm12313-201ENSMUST00000121347 421 ntBASIC6.88□□□□□ -1.31
Ddx56Q9D0R4 Gm3810-201ENSMUST00000122413 476 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms