Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm13059-201ENSMUST00000119881 398 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm11866-201ENSMUST00000120209 335 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm11233-201ENSMUST00000122357 634 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm15274-201ENSMUST00000131442 291 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm21979-201ENSMUST00000139887 291 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm15259-201ENSMUST00000151262 291 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm5283-201ENSMUST00000177874 334 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm5260-201ENSMUST00000186157 949 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm18547-201ENSMUST00000192439 811 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Ighv8-1-201ENSMUST00000194897 291 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm17824-201ENSMUST00000197690 805 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm6366-201ENSMUST00000198766 826 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm45343-201ENSMUST00000210452 828 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdha9Q91Y11 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Pcdha9Q91Y11 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdha9Q91Y11 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Pcdha9Q91Y11 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdha9Q91Y11 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdha9Q91Y11 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Pcdha9Q91Y11 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm11483-201ENSMUST00000119839 247 ntBASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm12115-201ENSMUST00000119969 447 ntBASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm13669-201ENSMUST00000122366 457 ntBASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm23467-201ENSMUST00000157127 159 ntBASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm3025-201ENSMUST00000163454 489 ntBASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm3077-201ENSMUST00000165903 627 ntBASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm2878-201ENSMUST00000170173 486 ntBASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Mir6374-201ENSMUST00000184003 107 ntBASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm33571-201ENSMUST00000193271 657 ntBASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm7492-201ENSMUST00000201745 725 ntBASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm43895-201ENSMUST00000203219 855 ntBASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm45473-201ENSMUST00000211452 616 ntBASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm24032-201ENSMUST00000083932 159 ntBASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm10780-201ENSMUST00000099459 285 ntBASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdha9Q91Y11 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms