Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm13590-201ENSMUST00000120183 1588 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm24069-201ENSMUST00000104512 127 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm14772-201ENSMUST00000116562 514 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm11462-201ENSMUST00000117749 562 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm14614-201ENSMUST00000119873 384 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm22600-201ENSMUST00000157598 269 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm23633-201ENSMUST00000175293 119 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm26509-201ENSMUST00000180947 948 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm29013-201ENSMUST00000187431 237 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm412-201ENSMUST00000193360 948 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm19104-201ENSMUST00000198392 679 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm18193-201ENSMUST00000210017 772 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm45405-201ENSMUST00000211544 609 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm20946-201ENSMUST00000212367 461 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 AC159293.2-201ENSMUST00000222289 424 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm22351-201ENSMUST00000083925 107 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Olfr687-201ENSMUST00000098154 938 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CopaQ8CIE6 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.54□□□□□ -1.36
CopaQ8CIE6 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CopaQ8CIE6 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CopaQ8CIE6 Gm45172-201ENSMUST00000206054 1301 ntBASIC6.53□□□□□ -1.36
CopaQ8CIE6 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CopaQ8CIE6 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CopaQ8CIE6 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CopaQ8CIE6 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.53□□□□□ -1.36
CopaQ8CIE6 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CopaQ8CIE6 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CopaQ8CIE6 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
CopaQ8CIE6 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CopaQ8CIE6 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CopaQ8CIE6 Gm11920-201ENSMUST00000118491 563 ntBASIC6.53□□□□□ -1.36
CopaQ8CIE6 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.53□□□□□ -1.36
CopaQ8CIE6 Gm14375-201ENSMUST00000119490 855 ntBASIC6.53□□□□□ -1.36
CopaQ8CIE6 Gm11504-201ENSMUST00000120211 173 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms